RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 NAA15Q9BXJ9 866 aaKnown RBP16.9■□□□□ 0.3
MRPL55-220ENST00000411464 STK33Q9BYT3 514 aa16.9■□□□□ 0.3
MRPL55-220ENST00000411464 MAGEB5Q9BZ81 275 aa16.9■□□□□ 0.3
MRPL55-220ENST00000411464 EDEM3Q9BZQ6 932 aa16.9■□□□□ 0.3
MRPL55-220ENST00000411464 ATXN7L1Q9ULK2 861 aaPredicted RBP16.9■□□□□ 0.3
MRPL55-220ENST00000411464 GPR34Q9UPC5 381 aa16.9■□□□□ 0.3
MRPL55-220ENST00000411464 MFHAS1Q9Y4C4 1052 aa16.9■□□□□ 0.3
MRPL55-220ENST00000411464 PCDHGA7Q9Y5G6 932 aa16.9■□□□□ 0.3
MRPL55-220ENST00000411464 TRPM6Q9BX84 2022 aa16.9■□□□□ 0.3
MRPL55-220ENST00000411464 RASGRP1O95267 797 aa16.89■□□□□ 0.29
MRPL55-220ENST00000411464 CELA2BP08218 269 aaPredicted RBP16.89■□□□□ 0.29
MRPL55-220ENST00000411464 MMP8P22894 467 aa16.89■□□□□ 0.29
MRPL55-220ENST00000411464 UGT1A5P35504 534 aa16.89■□□□□ 0.29
MRPL55-220ENST00000411464 CCL7P80098 99 aa16.89■□□□□ 0.29
MRPL55-220ENST00000411464 ELP6Q0PNE2 266 aa16.89■□□□□ 0.29
MRPL55-220ENST00000411464 IRF4Q15306 451 aa16.89■□□□□ 0.29
MRPL55-220ENST00000411464 TCEA2Q15560 299 aa16.89■□□□□ 0.29
MRPL55-220ENST00000411464 HSP90AA4PQ58FG1 418 aa16.89■□□□□ 0.29
MRPL55-220ENST00000411464 ENPP7Q6UWV6 458 aa16.89■□□□□ 0.29
MRPL55-220ENST00000411464 STRADAQ7RTN6 431 aa16.89■□□□□ 0.29
MRPL55-220ENST00000411464 B3GNT8Q7Z7M8 397 aa16.89■□□□□ 0.29
MRPL55-220ENST00000411464 GKN2Q86XP6 184 aa16.89■□□□□ 0.29
MRPL55-220ENST00000411464 ZNF677Q86XU0 584 aa16.89■□□□□ 0.29
MRPL55-220ENST00000411464 KYQ8NBH2 561 aa16.89■□□□□ 0.29
MRPL55-220ENST00000411464 OR6C4Q8NGE1 309 aa16.89■□□□□ 0.29
MRPL55-220ENST00000411464 ATL2Q8NHH9 583 aa16.89■□□□□ 0.29
MRPL55-220ENST00000411464 GPT2Q8TD30 523 aa16.89■□□□□ 0.29
MRPL55-220ENST00000411464 EPS8L1Q8TE68 723 aa16.89■□□□□ 0.29
MRPL55-220ENST00000411464 TSACCQ96A04 125 aaPredicted RBP16.89■□□□□ 0.29
MRPL55-220ENST00000411464 CCDC74AQ96AQ1 378 aa16.89■□□□□ 0.29
MRPL55-220ENST00000411464 C2CD4BA6NLJ0 364 aa16.88■□□□□ 0.29
MRPL55-220ENST00000411464 F8VZ95 297 aa16.88■□□□□ 0.29
MRPL55-220ENST00000411464 PYCARD-AS1I3L0S3 204 aa16.88■□□□□ 0.29
MRPL55-220ENST00000411464 RPLP0P05388 317 aaKnown RBP16.88■□□□□ 0.29
MRPL55-220ENST00000411464 PTPN9P43378 593 aa16.88■□□□□ 0.29
MRPL55-220ENST00000411464 INHBCP55103 352 aa16.88■□□□□ 0.29
MRPL55-220ENST00000411464 SRP54P61011 504 aaKnown RBP16.88■□□□□ 0.29
MRPL55-220ENST00000411464 ALG11Q2TAA5 492 aa16.88■□□□□ 0.29
MRPL55-220ENST00000411464 WSCD2Q2TBF2 565 aa16.88■□□□□ 0.29
MRPL55-220ENST00000411464 TMEM52BQ4KMG9 183 aa16.88■□□□□ 0.29
MRPL55-220ENST00000411464 USP53Q70EK8 1073 aa16.88■□□□□ 0.29
MRPL55-220ENST00000411464 PRICKLE2Q7Z3G6 844 aa16.88■□□□□ 0.29
MRPL55-220ENST00000411464 CCDC185Q8N715 623 aa16.88■□□□□ 0.29
MRPL55-220ENST00000411464 NETO2Q8NC67 525 aa16.88■□□□□ 0.29
MRPL55-220ENST00000411464 FAM172AQ8WUF8 416 aa16.88■□□□□ 0.29
MRPL55-220ENST00000411464 TMEM74Q96NL1 305 aa16.88■□□□□ 0.29
MRPL55-220ENST00000411464 NCAPGQ9BPX3 1015 aa16.88■□□□□ 0.29
MRPL55-220ENST00000411464 CPEB1Q9BZB8 566 aaKnown RBP16.88■□□□□ 0.29
MRPL55-220ENST00000411464 FOXP3Q9BZS1 431 aa16.88■□□□□ 0.29
MRPL55-220ENST00000411464 RABGEF1Q9UJ41 708 aa16.88■□□□□ 0.29
MRPL55-220ENST00000411464 COQ6Q9Y2Z9 468 aa16.88■□□□□ 0.29
MRPL55-220ENST00000411464 HEMK1Q9Y5R4 338 aaPredicted RBP16.88■□□□□ 0.29
MRPL55-220ENST00000411464 D6RAR5 112 aa16.87■□□□□ 0.29
MRPL55-220ENST00000411464 EFSO43281 561 aa16.87■□□□□ 0.29
MRPL55-220ENST00000411464 WISP1O95388 367 aa16.87■□□□□ 0.29
MRPL55-220ENST00000411464 JMJD7P0C870 316 aa16.87■□□□□ 0.29
MRPL55-220ENST00000411464 KRT3P12035 628 aa16.87■□□□□ 0.29
MRPL55-220ENST00000411464 KRT10P13645 584 aa16.87■□□□□ 0.29
MRPL55-220ENST00000411464 EPHB2P29323 1055 aa16.87■□□□□ 0.29
MRPL55-220ENST00000411464 YBEYP58557 167 aaPredicted RBP16.87■□□□□ 0.29
MRPL55-220ENST00000411464 UBE2HP62256 183 aa16.87■□□□□ 0.29
MRPL55-220ENST00000411464 CDR2Q01850 454 aa16.87■□□□□ 0.29
MRPL55-220ENST00000411464 C1QBPQ07021 282 aaKnown RBP16.87■□□□□ 0.29
MRPL55-220ENST00000411464 INPP5AQ14642 412 aa16.87■□□□□ 0.29
MRPL55-220ENST00000411464 NFATC4Q14934 902 aa16.87■□□□□ 0.29
MRPL55-220ENST00000411464 XKR5Q6UX68 686 aa16.87■□□□□ 0.29
MRPL55-220ENST00000411464 SLFN11Q7Z7L1 901 aa16.87■□□□□ 0.29
MRPL55-220ENST00000411464 RTL3Q8N8U3 475 aaKnown RBP16.87■□□□□ 0.29
MRPL55-220ENST00000411464 JOSD2Q8TAC2 188 aa16.87■□□□□ 0.29
MRPL55-220ENST00000411464 SLC30A5Q8TAD4 765 aa16.87■□□□□ 0.29
MRPL55-220ENST00000411464 HCAR2Q8TDS4 363 aa16.87■□□□□ 0.29
MRPL55-220ENST00000411464 SLC20A1Q8WUM9 679 aa16.87■□□□□ 0.29
MRPL55-220ENST00000411464 CENPIQ92674 756 aaPredicted RBP16.87■□□□□ 0.29
MRPL55-220ENST00000411464 HMCESQ96FZ2 354 aa16.87■□□□□ 0.29
MRPL55-220ENST00000411464 ARHGAP9Q9BRR9 750 aa16.87■□□□□ 0.29
MRPL55-220ENST00000411464 APOOQ9BUR5 198 aa16.87■□□□□ 0.29
MRPL55-220ENST00000411464 FAM117AQ9C073 453 aa16.87■□□□□ 0.29
MRPL55-220ENST00000411464 LRRN3Q9H3W5 708 aa16.87■□□□□ 0.29
MRPL55-220ENST00000411464 KLQ9UEF7 1012 aa16.87■□□□□ 0.29
MRPL55-220ENST00000411464 NOCTQ9UK39 431 aaKnown RBP16.87■□□□□ 0.29
MRPL55-220ENST00000411464 NEU3Q9UQ49 428 aa16.87■□□□□ 0.29
MRPL55-220ENST00000411464 OR1A2Q9Y585 309 aa16.87■□□□□ 0.29
MRPL55-220ENST00000411464 GFPT2O94808 682 aa16.86■□□□□ 0.29
MRPL55-220ENST00000411464 TNFP01375 233 aa16.86■□□□□ 0.29
MRPL55-220ENST00000411464 CYP1A1P04798 512 aaPredicted RBP16.86■□□□□ 0.29
MRPL55-220ENST00000411464 ERCC5P28715 1186 aaPredicted RBP16.86■□□□□ 0.29
MRPL55-220ENST00000411464 HDAC4P56524 1084 aa16.86■□□□□ 0.29
MRPL55-220ENST00000411464 NFATC3Q12968 1075 aa16.86■□□□□ 0.29
MRPL55-220ENST00000411464 GRM3Q14832 879 aa16.86■□□□□ 0.29
MRPL55-220ENST00000411464 UGP2Q16851 508 aa16.86■□□□□ 0.29
MRPL55-220ENST00000411464 CFAP58Q5T655 872 aa16.86■□□□□ 0.29
MRPL55-220ENST00000411464 ERAP2Q6P179 960 aa16.86■□□□□ 0.29
MRPL55-220ENST00000411464 NTAN1Q96AB6 310 aa16.86■□□□□ 0.29
MRPL55-220ENST00000411464 SGF29Q96ES7 293 aa16.86■□□□□ 0.29
MRPL55-220ENST00000411464 C11orf70Q9BRQ4 267 aa16.86■□□□□ 0.29
MRPL55-220ENST00000411464 SUV39H2Q9H5I1 410 aa16.86■□□□□ 0.29
MRPL55-220ENST00000411464 PCDH12Q9NPG4 1184 aa16.86■□□□□ 0.29
MRPL55-220ENST00000411464 SEPT10Q9P0V9 454 aa16.86■□□□□ 0.29
MRPL55-220ENST00000411464 PISDQ9UG56 409 aa16.86■□□□□ 0.29
MRPL55-220ENST00000411464 ACSL6Q9UKU0 697 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms