RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 CPXM2Q8N436 756 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 C1orf131Q8NDD1 294 aaKnown RBP2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PRSS3P2Q8NHM4 247 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 FAR1Q8WVX9 515 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 RAB40AQ8WXH6 277 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 EVI5LQ96CN4 794 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MCRS1Q96EZ8 462 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SH2D3AQ9BRG2 576 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 H2AFJQ9BTM1 129 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 EFHD1Q9BUP0 239 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MROH8Q9H579 483 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TBC1D22BQ9NU19 505 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ASIC5Q9NY37 505 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TERF2IPQ9NYB0 399 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 GRHL1Q9NZI5 618 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 FBXO9Q9UK97 447 aaPredicted RBP2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TRPM1Q7Z4N2 1603 aa2.77□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MYOM1P52179 1685 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TCRBV5S1A1TA0A578 114 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 GLTPD2A6NH11 291 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 M0QZQ0 153 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 GTPBP1O00178 669 aaKnown RBP2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 RHODO00212 210 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 DHX16O60231 1041 aaKnown RBP2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TMCC1O94876 653 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 F9P00740 461 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SERPINC1P01008 464 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 HSP90AB1P08238 724 aaKnown RBP2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ST6GAL1P15907 406 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PTPN2P17706 415 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ITPKBP27987 946 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 FMO4P31512 558 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 HNF1BP35680 557 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SLC16A2P36021 539 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CPA2P48052 419 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CCR5P51681 352 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PROK1P58294 105 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TMF1P82094 1093 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SHC2P98077 582 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 EFNB1P98172 346 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CALD1Q05682 793 aaKnown RBP2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PMPCAQ10713 525 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 LRMPQ12912 555 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 RUNX2Q13950 521 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 EIF4A2Q14240 407 aaKnown RBP2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CRYMQ14894 314 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 VEPH1Q14D04 833 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TAF11Q15544 211 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 DPCR1Q3MIW9 517 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 C11orf87Q6NUJ2 197 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 AAGABQ6PD74 315 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SARM1Q6SZW1 724 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 NEK10Q6ZWH5 1172 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TMTC3Q6ZXV5 915 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 USP43Q70EL4 1123 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 R3HCC1LQ7Z5L2 792 aaKnown RBP2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 NEK8Q86SG6 692 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 WDR5BQ86VZ2 330 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PALB2Q86YC2 1186 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 RFX6Q8HWS3 928 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 DIS3L2Q8IYB7 885 aaKnown RBP2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ADSSL1Q8N142 457 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 GALNT16Q8N428 558 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SCAIQ8N9R8 606 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 LSM14AQ8ND56 463 aaKnown RBP2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TDRD7Q8NHU6 1098 aaKnown RBP2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MPLKIPQ8TAP9 179 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 BICD2Q8TD16 824 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PIGOQ8TEQ8 1089 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 WIPF2Q8TF74 440 aaPredicted RBP2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 CLEC4CQ8WTT0 213 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ATP2A3Q93084 1043 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 REPS1Q96D71 796 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 KAZALD1Q96I82 304 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 RITA1Q96K30 269 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ZNF48Q96MX3 618 aaPredicted RBP2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 EYA3Q99504 573 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 MMTAG2Q9BU76 263 aaKnown RBP2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TMX4Q9H1E5 349 aaPredicted RBP2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 RMI1Q9H9A7 625 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 EIF2B3Q9NR50 452 aaKnown RBP2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SLC22A11Q9NSA0 550 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 BABAM1Q9NWV8 329 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 EHD2Q9NZN4 543 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 FLRT1Q9NZU1 646 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TBC1D14Q9P2M4 693 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 AASSQ9UDR5 926 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 HSF4Q9ULV5 492 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 RABGAP1Q9Y3P9 1069 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SLIT3O75094 1523 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 KAT6BQ8WYB5 2073 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PPLO60437 1756 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ITSN1Q15811 1721 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 ABCA3Q99758 1704 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 SHANK3Q9BYB0 1731 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 PEAK1Q9H792 1746 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 TRPM3Q9HCF6 1732 aaPredicted RBP2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 LMO7Q8WWI1 1683 aa2.76□□□□□ -1.97
RNU6-1140P-201ENST00000410517 RTL1A6NKG5 1358 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms