RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 RB1P06400 928 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 FAM90A13PP0C7W8 464 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 FAM90A24PP0C7X0 464 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 KRT10P13645 584 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 SRD5A1P18405 259 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 GABRB1P18505 474 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 EPHB2P29323 1055 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 GCH1P30793 250 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 ACVRL1P37023 503 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 F2RL1P55085 397 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 PROK1P58294 105 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 FOXF2Q12947 444 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 RUNX2Q13950 521 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 HSPB2Q16082 182 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 KRT24Q2M2I5 525 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 TCTN1Q2MV58 587 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 CXorf66Q5JRM2 361 aaPredicted RBP4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 ENTPD8Q5MY95 495 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 PAPD7Q5XG87 772 aaKnown RBP4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 HMBOX1Q6NT76 420 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 DEF8Q6ZN54 512 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 DENND6AQ8IWF6 608 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 BOLLQ8N9W6 283 aaKnown RBP4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 SNAPC3Q92966 411 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 ARHGEF26Q96DR7 871 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 ZNF419Q96HQ0 510 aaPredicted RBP4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 TMEM68Q96MH6 324 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 NCAPGQ9BPX3 1015 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 TEX12Q9BXU0 123 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 SEMA4CQ9C0C4 833 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 PDZD7Q9H5P4 517 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 KIF9Q9HAQ2 790 aa4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 NFKBIL1Q9UBC1 381 aaPredicted RBP4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 CHORDC1Q9UHD1 332 aaPredicted RBP4.23□□□□□ -1.73
RNU2-28P-201ENST00000410457 TYW5A2RUC4 315 aaKnown RBP4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 IFNL4K9M1U5 179 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 DKC1O60832 514 aaKnown RBP eCLIP4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 SLC25A12O75746 678 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 CLTBP09497 229 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 CTSAP10619 480 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 AGAP20933 346 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 CERS1P27544 350 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 NHLH1Q02575 133 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 GHRHRQ02643 423 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 FHL2Q14192 279 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 DRAP1Q14919 205 aaPredicted RBP4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 ASTE1Q2TB18 679 aaPredicted RBP4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 PCGF3Q3KNV8 242 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 SOWAHCQ53LP3 525 aaPredicted RBP4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 C6orf141Q5SZD1 244 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 KIAA1614Q5VZ46 1190 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 GPR139Q6DWJ6 353 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 NAA16Q6N069 864 aaPredicted RBP4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 ZNF782Q6ZMW2 699 aaPredicted RBP4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 ZNF66Q6ZN08 573 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 ZNF788Q6ZQV5 615 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 ADGRA1Q86SQ6 560 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 TDRPQ86YL5 185 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 TEX11Q8IYF3 940 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 LRRC57Q8N9N7 239 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 NELL1Q92832 810 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 OTULINQ96BN8 352 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 ZC3HAV1LQ96H79 300 aaKnown RBP4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 SIN3AQ96ST3 1273 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 YME1L1Q96TA2 773 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 MXRA8Q9BRK3 442 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 SCNM1Q9BWG6 230 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 NUF2Q9BZD4 464 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 CDT1Q9H211 546 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 MVB12BQ9H7P6 319 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 BPIFA1Q9NP55 256 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 THSD1Q9NS62 852 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 TMEM45AQ9NWC5 275 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 ANKRD10Q9NXR5 420 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 CTNNAL1Q9UBT7 734 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 PLEKHB1Q9UF11 243 aaPredicted RBP4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 NDRG3Q9UGV2 375 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 RAP2CQ9Y3L5 183 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 A3GALT2U3KPV4 340 aa4.22□□□□□ -1.73
RNU2-28P-201ENST00000410457 COL11A2P13942 1736 aaPredicted RBP4.21□□□□□ -1.73
RNU2-28P-201ENST00000410457 FAM237AA0A1B0GTK4 181 aa4.21□□□□□ -1.74
RNU2-28P-201ENST00000410457 BTBD18B2RXH4 712 aa4.21□□□□□ -1.74
RNU2-28P-201ENST00000410457 SH2B2O14492 632 aaPredicted RBP4.21□□□□□ -1.74
RNU2-28P-201ENST00000410457 HSPB6O14558 160 aa4.21□□□□□ -1.74
RNU2-28P-201ENST00000410457 TP73O15350 636 aa4.21□□□□□ -1.74
RNU2-28P-201ENST00000410457 TLX3O43711 291 aaPredicted RBP4.21□□□□□ -1.74
RNU2-28P-201ENST00000410457 KLK8O60259 260 aa4.21□□□□□ -1.74
RNU2-28P-201ENST00000410457 CNOT3O75175 753 aaKnown RBP4.21□□□□□ -1.74
RNU2-28P-201ENST00000410457 ENO3P13929 434 aaPredicted RBP4.21□□□□□ -1.74
RNU2-28P-201ENST00000410457 ZNF182P17025 639 aaPredicted RBP4.21□□□□□ -1.74
RNU2-28P-201ENST00000410457 TMEM11P17152 192 aa4.21□□□□□ -1.74
RNU2-28P-201ENST00000410457 ITGAXP20702 1163 aa4.21□□□□□ -1.74
RNU2-28P-201ENST00000410457 TNFSF8P32971 234 aa4.21□□□□□ -1.74
RNU2-28P-201ENST00000410457 SHMT1P34896 483 aa4.21□□□□□ -1.74
RNU2-28P-201ENST00000410457 RFC1P35251 1148 aaPredicted RBP4.21□□□□□ -1.74
RNU2-28P-201ENST00000410457 PTH2RP49190 550 aa4.21□□□□□ -1.74
RNU2-28P-201ENST00000410457 TFAP4Q01664 338 aa4.21□□□□□ -1.74
RNU2-28P-201ENST00000410457 GRIK3Q13003 919 aa4.21□□□□□ -1.74
RNU2-28P-201ENST00000410457 ADIPOQQ15848 244 aa4.21□□□□□ -1.74
RNU2-28P-201ENST00000410457 NTRK2Q16620 822 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms