RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 MED26O95402 600 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 GABRR2P28476 465 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 CCT3P49368 545 aaKnown RBP11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 CNTN2Q02246 1040 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 NEK5Q6P3R8 708 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 USP50Q70EL3 339 aaPredicted RBP11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 APTXQ7Z2E3 356 aaKnown RBP11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 ZDHHC13Q8IUH4 622 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 TSEN15Q8WW01 171 aaKnown RBP11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 HTR3CQ8WXA8 447 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 FATE1Q969F0 183 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 VPS35Q96QK1 796 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 GAL3ST4Q96RP7 486 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 NDNQ99608 321 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 FAM192AQ9GZU8 254 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 ARMCX1Q9P291 453 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 DUSP10Q9Y6W6 482 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 NFASCO94856 1347 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 SH3D21A4FU49 640 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 PPP1R37O75864 691 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 GLUD1P00367 558 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 SCNN1GP51170 649 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 C16orf46Q6P387 395 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 CRISPLD1Q9H336 500 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 NRDE2Q9H7Z3 1164 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 RIMKLBQ9ULI2 386 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 ATP9AO75110 1047 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 AXLP30530 894 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 MAT2AP31153 395 aaKnown RBP11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 NEK3P51956 506 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 PGDP52209 483 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 PURAQ00577 322 aaKnown RBP11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 VGLL4Q14135 290 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 ZNF846Q147U1 533 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 TAB1Q15750 504 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 LPCAT2Q7L5N7 544 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 ZNF410Q86VK4 478 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 PRSS58Q8IYP2 241 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 SLC16A10Q8TF71 515 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 CASKIN2Q8WXE0 1202 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 DNASE1L2Q92874 299 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 ITCHQ96J02 903 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 MKNK1Q9BUB5 465 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 FTHL17Q9BXU8 183 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 MOCS1Q9NZB8 636 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 PHF24Q9UPV7 400 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 SHROOM3Q8TF72 1996 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 CCT8L1PA6NM43 557 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 EIF3HO15372 352 aaKnown RBP eCLIP11.3□□□□□ -0.62e-6■□□□□ 9.9
PRPF40A-202ENST00000410080 CATP04040 527 aaKnown RBP11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 PIRTP0C851 137 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 TSPAN8P19075 237 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 CRADDP78560 199 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 NR1D2Q14995 579 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 AP1S2P56377 157 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 TRAP1Q12931 704 aaKnown RBP11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 MYBPC3Q14896 1274 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 SGCBQ16585 318 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 LYPLAL1Q5VWZ2 237 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 TMPRSS11BQ86T26 416 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 HOMEZQ8IX15 550 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 FNDC11Q9BVV2 318 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 TMX2Q9Y320 296 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 MEGF6O75095 1541 aa11.3□□□□□ -0.6
PRPF40A-202ENST00000410080 PEX14O75381 377 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 ZNF432O94892 652 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 UBA1P22314 1058 aaKnown RBP11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 RNF148Q8N7C7 305 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 CYP2W1Q8TAV3 490 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 HYKKA2RU49 373 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 CARNS1A5YM72 827 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 CLDN5O00501 218 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 BPNT1O95861 308 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 CYB5AP00167 134 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 SAGP10523 405 aaPredicted RBP11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 TGFB3P10600 412 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 CHKAP35790 457 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 SAMD4BQ5PRF9 694 aaKnown RBP11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 OR2L3Q8NG85 312 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 NELL1Q92832 810 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 P2RX7Q99572 595 aaKnown RBP11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 SEMA6BQ9H3T3 888 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 CIDEBQ9UHD4 219 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 SPEF1Q9Y4P9 236 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 WRBO00258 174 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 ME2P23368 584 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 EIF2S3P41091 472 aaKnown RBP11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 GDI2P50395 445 aaKnown RBP11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 ZNF155Q12901 538 aaPredicted RBP11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 ZNF276Q8N554 614 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 PTCD2Q8WV60 388 aaKnown RBP11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 MAP3K14Q99558 947 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 ZSWIM1Q9BR11 485 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 EHD3Q9NZN3 535 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 SYNPO2Q9UMS6 1093 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 SMIM10L2AP0DMW4 78 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 SMIM10L2BP0DMW5 78 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 IRF8Q02556 426 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 UTS2BQ765I0 119 aa11.29□□□□□ -0.6
PRPF40A-202ENST00000410080 SNX20Q7Z614 316 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms