RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 GRIN2CQ14957 1233 aa7.58□□□□□ -1.2
CXCR4-202ENST00000409817 VEPH1Q14D04 833 aa7.58□□□□□ -1.2
CXCR4-202ENST00000409817 TRIM60Q495X7 471 aa7.58□□□□□ -1.2
CXCR4-202ENST00000409817 ALFQ53S48 1182 aa7.58□□□□□ -1.2
CXCR4-202ENST00000409817 FAM133BQ5BKY9 247 aaKnown RBP7.58□□□□□ -1.2
CXCR4-202ENST00000409817 N4BP2L1Q5TBK1 243 aaPredicted RBP7.58□□□□□ -1.2
CXCR4-202ENST00000409817 RAP1GAP2Q684P5 730 aa7.58□□□□□ -1.2
CXCR4-202ENST00000409817 FSTL4Q6MZW2 842 aa7.58□□□□□ -1.2
CXCR4-202ENST00000409817 KDELC1Q6UW63 502 aa7.58□□□□□ -1.2
CXCR4-202ENST00000409817 PRSS55Q6UWB4 352 aaPredicted RBP7.58□□□□□ -1.2
CXCR4-202ENST00000409817 TAS1R1Q7RTX1 841 aa7.58□□□□□ -1.2
CXCR4-202ENST00000409817 TFAP2DQ7Z6R9 452 aa7.58□□□□□ -1.2
CXCR4-202ENST00000409817 DEFB128Q7Z7B8 93 aa7.58□□□□□ -1.2
CXCR4-202ENST00000409817 GALNT7Q86SF2 657 aa7.58□□□□□ -1.2
CXCR4-202ENST00000409817 CRLF3Q8IUI8 442 aa7.58□□□□□ -1.2
CXCR4-202ENST00000409817 GALNT12Q8IXK2 581 aa7.58□□□□□ -1.2
CXCR4-202ENST00000409817 CMTR2Q8IYT2 770 aaKnown RBP7.58□□□□□ -1.2
CXCR4-202ENST00000409817 SPATA22Q8NHS9 363 aa7.58□□□□□ -1.2
CXCR4-202ENST00000409817 IGSF8Q969P0 613 aa7.58□□□□□ -1.2
CXCR4-202ENST00000409817 TADA1Q96BN2 335 aa7.58□□□□□ -1.2
CXCR4-202ENST00000409817 ZNF689Q96CS4 500 aaPredicted RBP7.58□□□□□ -1.2
CXCR4-202ENST00000409817 ZNF512Q96ME7 567 aaPredicted RBP7.58□□□□□ -1.2
CXCR4-202ENST00000409817 GPR22Q99680 433 aa7.58□□□□□ -1.2
CXCR4-202ENST00000409817 FAM167BQ9BTA0 163 aa7.58□□□□□ -1.2
CXCR4-202ENST00000409817 NACA2Q9H009 215 aa7.58□□□□□ -1.2
CXCR4-202ENST00000409817 STN1Q9H668 368 aaKnown RBP7.58□□□□□ -1.2
CXCR4-202ENST00000409817 C11orf16Q9NQ32 467 aa7.58□□□□□ -1.2
CXCR4-202ENST00000409817 SNX15Q9NRS6 342 aa7.58□□□□□ -1.2
CXCR4-202ENST00000409817 KCNK4Q9NYG8 393 aa7.58□□□□□ -1.2
CXCR4-202ENST00000409817 UBP1Q9NZI7 540 aa7.58□□□□□ -1.2
CXCR4-202ENST00000409817 TRPM5Q9NZQ8 1165 aa7.58□□□□□ -1.2
CXCR4-202ENST00000409817 NYNRINQ9P2P1 1898 aaKnown RBP7.57□□□□□ -1.2
CXCR4-202ENST00000409817 PRAMEF11O60813 436 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 CLDN11O75508 207 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 CNTN5O94779 1100 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 CLTBP09497 229 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 DLDP09622 509 aaKnown RBP7.57□□□□□ -1.2
CXCR4-202ENST00000409817 TPH1P17752 444 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 CES1P23141 567 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 NMBRP28336 390 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 PPM1AP35813 382 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 SERPINH1P50454 418 aaKnown RBP7.57□□□□□ -1.2
CXCR4-202ENST00000409817 PRKAA2P54646 552 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 WNT3AP56704 352 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 NCALDP61601 193 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 OCRLQ01968 901 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 BST1Q10588 318 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 SFSWAPQ12872 951 aaKnown RBP7.57□□□□□ -1.2
CXCR4-202ENST00000409817 STX3Q13277 289 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 OLIG2Q13516 323 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 RAB33AQ14088 237 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 RFTN1Q14699 578 aaPredicted RBP7.57□□□□□ -1.2
CXCR4-202ENST00000409817 CHI3L2Q15782 390 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 SPRED3Q2MJR0 410 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.57□□□□□ -1.2
CXCR4-202ENST00000409817 FAM91A1Q658Y4 838 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 CES3Q6UWW8 571 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.57□□□□□ -1.2
CXCR4-202ENST00000409817 CHST9Q7L1S5 443 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 SLC39A11Q8N1S5 342 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 DCLK2Q8N568 766 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 PPP1R14CQ8TAE6 165 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 RDH11Q8TC12 318 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 INPP5DQ92835 1189 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 ERP27Q96DN0 273 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 PABPC5Q96DU9 382 aaKnown RBP7.57□□□□□ -1.2
CXCR4-202ENST00000409817 ZNF419Q96HQ0 510 aaPredicted RBP7.57□□□□□ -1.2
CXCR4-202ENST00000409817 VPS39Q96JC1 886 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 TSNARE1Q96NA8 513 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 APOL2Q9BQE5 337 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 CLSTN3Q9BQT9 956 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 POLR1EQ9GZS1 481 aaKnown RBP7.57□□□□□ -1.2
CXCR4-202ENST00000409817 C12orf65Q9H3J6 166 aaKnown RBP7.57□□□□□ -1.2
CXCR4-202ENST00000409817 CCSER2Q9H7U1 834 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 ECT2Q9H8V3 914 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.57□□□□□ -1.2
CXCR4-202ENST00000409817 TREX1Q9NSU2 369 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 TMEM39AQ9NV64 488 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 RIMKLBQ9ULI2 386 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 MAGED2Q9UNF1 606 aaPredicted RBP7.57□□□□□ -1.2
CXCR4-202ENST00000409817 CHKBQ9Y259 395 aa7.57□□□□□ -1.2
CXCR4-202ENST00000409817 LTBP2Q14767 1821 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 ST8SIA5O15466 376 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 PMPCBO75439 489 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 PROCP04070 461 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 SERPINE1P05121 402 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 URODP06132 367 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 FAM157BP0CG42 384 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 HMGA1P17096 107 aaKnown RBP7.56□□□□□ -1.2
CXCR4-202ENST00000409817 HLA-DPA1P20036 260 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 ARCN1P48444 511 aaKnown RBP7.56□□□□□ -1.2
CXCR4-202ENST00000409817 CSRP3P50461 194 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 KPNA2P52292 529 aaKnown RBP7.56□□□□□ -1.2
CXCR4-202ENST00000409817 SLC10A7Q0GE19 358 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 PLD1Q13393 1074 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 THOC5Q13769 683 aaKnown RBP7.56□□□□□ -1.2
CXCR4-202ENST00000409817 ZNF235Q14590 738 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 LBRQ14739 615 aaKnown RBP7.56□□□□□ -1.2
CXCR4-202ENST00000409817 POU6F1Q14863 301 aa7.56□□□□□ -1.2
CXCR4-202ENST00000409817 TAF12Q16514 161 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms