RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 HOXC11O43248 304 aaPredicted RBP12.55□□□□□ -0.4
CHMP3-204ENST00000409727 ZNF821O75541 412 aaPredicted RBP12.55□□□□□ -0.4
CHMP3-204ENST00000409727 VAPBO95292 243 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 IGSF6O95976 241 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 FGF1P05230 155 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 CES1P23141 567 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 ADRA1DP25100 572 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 SLC8A1P32418 973 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 VASPP50552 380 aaPredicted RBP12.55□□□□□ -0.4
CHMP3-204ENST00000409727 TMPRSS15P98073 1019 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 MGAT5Q09328 741 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 PTPRCAPQ14761 206 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 PTPRRQ15256 657 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 CCDC85BQ15834 202 aaPredicted RBP12.55□□□□□ -0.4
CHMP3-204ENST00000409727 CNGA3Q16281 694 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 TTC19Q6DKK2 380 aaPredicted RBP12.55□□□□□ -0.4
CHMP3-204ENST00000409727 C22orf39Q6P5X5 142 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 KCNMB4Q86W47 210 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 SLC26A11Q86WA9 606 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 MFSD6LQ8IWD5 586 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 CDKL2Q92772 493 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 TTC17Q96AE7 1141 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 LRCH3Q96II8 777 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 MSLNLQ96KJ4 702 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 SLC2A11Q9BYW1 496 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 PPCSQ9HAB8 311 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 OBP2AQ9NY56 170 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 FETUBQ9UGM5 382 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 HS3ST2Q9Y278 367 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 PCDHB9Q9Y5E1 797 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 PSAT1Q9Y617 370 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 ARL5AQ9Y689 179 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 TRIOBPQ9H2D6 2365 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 A0A0U1RQS6 177 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 HEATR9A2RTY3 570 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 GOLGA8RI6L899 631 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 PRLP01236 227 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 EPOP01588 193 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 CISD3P0C7P0 127 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 PSMC3P17980 439 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 GDI1P31150 447 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 MTHFRP42898 656 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 PPP2R2AP63151 447 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 SULT2A1Q06520 285 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 SLC20A2Q08357 652 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 MSLNQ13421 630 aaPredicted RBP12.55□□□□□ -0.4
CHMP3-204ENST00000409727 BMPR2Q13873 1038 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 PDGFRLQ15198 375 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 DLG2Q15700 870 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 TNFAIP8L3Q5GJ75 292 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 Q6ZVU0 165 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 PLCD3Q8N3E9 789 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 OR2AP1Q8NGE2 309 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 KLF6Q99612 283 aaPredicted RBP12.55□□□□□ -0.4
CHMP3-204ENST00000409727 ADGRE3Q9BY15 652 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 IARS2Q9NSE4 1012 aaKnown RBP12.55□□□□□ -0.4
CHMP3-204ENST00000409727 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.55□□□□□ -0.41e-6■■■■□ 22.1
CHMP3-204ENST00000409727 ADAM21Q9UKJ8 722 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 ERVW-1Q9UQF0 538 aa12.55□□□□□ -0.4
CHMP3-204ENST00000409727 EYSQ5T1H1 3165 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 DOCK8Q8NF50 2099 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 RRP9O43818 475 aaKnown RBP12.54□□□□□ -0.4
CHMP3-204ENST00000409727 CTPS1P17812 591 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 ABL2P42684 1182 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 EPHB1P54762 984 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 AP1S1P61966 158 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 SNRPD1P62314 119 aaKnown RBP12.54□□□□□ -0.4
CHMP3-204ENST00000409727 BCL2L1Q07817 233 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 FCHO2Q0JRZ9 810 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 DMC1Q14565 340 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 GAB4Q2WGN9 574 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 TAOK1Q7L7X3 1001 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 METTL3Q86U44 580 aaKnown RBP12.54□□□□□ -0.4
CHMP3-204ENST00000409727 TRABD2AQ86V40 505 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 SFTPA1Q8IWL2 248 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 C4orf33Q8N1A6 199 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 ZNF366Q8N895 744 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.54□□□□□ -0.4
CHMP3-204ENST00000409727 SMRP1Q8NCR6 262 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 MDM1Q8TC05 714 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 NXPE3Q969Y0 559 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 ATXN7L3BQ96GX2 97 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 TRABDQ9H4I3 376 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 MTG2Q9H4K7 406 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 ZDHHC6Q9H6R6 413 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 KCNK9Q9NPC2 374 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 TXNDC16Q9P2K2 825 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 DEC1Q9P2X7 70 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 FBXO10Q9UK96 956 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 USP15Q9Y4E8 981 aaPredicted RBP12.54□□□□□ -0.4
CHMP3-204ENST00000409727 ARIH1Q9Y4X5 557 aaPredicted RBP12.54□□□□□ -0.4
CHMP3-204ENST00000409727 SPO11Q9Y5K1 396 aa12.54□□□□□ -0.4
CHMP3-204ENST00000409727 IQANK1A0A1B0GTG1 560 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 TTC34A8MYJ7 566 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 AURKAO14965 403 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 SPAG7O75391 227 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 BRAFP15056 766 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 CA4P22748 312 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 ABCG1P45844 678 aa12.53□□□□□ -0.4
CHMP3-204ENST00000409727 MLLT1Q03111 559 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms