RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 PPP1R10Q96QC0 940 aaKnown RBP15.58■□□□□ 0.09
LIMS2-205ENST00000409455 KCTD15Q96SI1 283 aaPredicted RBP15.58■□□□□ 0.09
LIMS2-205ENST00000409455 NEURL2Q9BR09 285 aa15.58■□□□□ 0.09
LIMS2-205ENST00000409455 SLC39A10Q9ULF5 831 aa15.58■□□□□ 0.09
LIMS2-205ENST00000409455 TMED5Q9Y3A6 229 aa15.58■□□□□ 0.09
LIMS2-205ENST00000409455 SAC3D1A6NKF1 404 aa15.58■□□□□ 0.08
LIMS2-205ENST00000409455 PGK1P00558 417 aa15.58■□□□□ 0.08
LIMS2-205ENST00000409455 HOXA11P31270 313 aaPredicted RBP15.58■□□□□ 0.08
LIMS2-205ENST00000409455 ARL4AP40617 200 aa15.58■□□□□ 0.08
LIMS2-205ENST00000409455 GLRBP48167 497 aa15.58■□□□□ 0.08
LIMS2-205ENST00000409455 CD151P48509 253 aa15.58■□□□□ 0.08
LIMS2-205ENST00000409455 NDST1P52848 882 aa15.58■□□□□ 0.08
LIMS2-205ENST00000409455 CSE1LP55060 971 aaKnown RBP15.58■□□□□ 0.08
LIMS2-205ENST00000409455 BNIP3Q12983 259 aa15.58■□□□□ 0.08
LIMS2-205ENST00000409455 LRP8Q14114 963 aa15.58■□□□□ 0.08
LIMS2-205ENST00000409455 ANO4Q32M45 955 aa15.58■□□□□ 0.08
LIMS2-205ENST00000409455 SLC10A6Q3KNW5 377 aa15.58■□□□□ 0.08
LIMS2-205ENST00000409455 MAP7D1Q3KQU3 841 aa15.58■□□□□ 0.08
LIMS2-205ENST00000409455 ERMP1Q7Z2K6 904 aa15.58■□□□□ 0.08
LIMS2-205ENST00000409455 SCUBE3Q8IX30 993 aa15.58■□□□□ 0.08
LIMS2-205ENST00000409455 SIX6OS1Q8N1H7 587 aa15.58■□□□□ 0.08
LIMS2-205ENST00000409455 CBR4Q8N4T8 237 aa15.58■□□□□ 0.08
LIMS2-205ENST00000409455 OR52K1Q8NGK4 314 aa15.58■□□□□ 0.08
LIMS2-205ENST00000409455 CAPNS2Q96L46 248 aa15.58■□□□□ 0.08
LIMS2-205ENST00000409455 DNAI2Q9GZS0 605 aa15.58■□□□□ 0.08
LIMS2-205ENST00000409455 SARDHQ9UL12 918 aa15.58■□□□□ 0.08
LIMS2-205ENST00000409455 VANGL2Q9ULK5 521 aa15.58■□□□□ 0.08
LIMS2-205ENST00000409455 TRIM17Q9Y577 477 aa15.58■□□□□ 0.08
LIMS2-205ENST00000409455 TRIM64A6NGJ6 449 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 PFKMP08237 780 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 GOT1P17174 413 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 ATICP31939 592 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 HADHAP40939 763 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 CDC42EP1Q00587 391 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 MERTKQ12866 999 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 ZBTB17Q13105 803 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 NR1D2Q14995 579 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 C6orf10Q5SRN2 563 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 INTS11Q5TA45 600 aaKnown RBP15.57■□□□□ 0.08
LIMS2-205ENST00000409455 PMF1Q6P1K2 205 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 TMEM26Q6ZUK4 368 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 LSMEM2Q8N112 164 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 ANKRD52Q8NB46 1076 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 OR2T34Q8NGX1 318 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 OR2T3Q8NH03 318 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 MAELQ96JY0 434 aaKnown RBP15.57■□□□□ 0.08
LIMS2-205ENST00000409455 KATNAL1Q9BW62 490 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 RMI1Q9H9A7 625 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 POLR1BQ9H9Y6 1135 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 ARMC1Q9NVT9 282 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 BFARQ9NZS9 450 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 KIAA1257Q9ULG3 409 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 ZSWIM8A7E2V4 1837 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 HTTP42858 3142 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 MFSD11O43934 449 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 SAT1P21673 171 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 GRIA3P42263 894 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 RXRGP48443 463 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 ATXN1P54253 815 aaKnown RBP15.57■□□□□ 0.08
LIMS2-205ENST00000409455 SEPT6Q14141 434 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 TMEM135Q86UB9 458 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 KCNMB4Q86W47 210 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 PELI3Q8N2H9 469 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 CCNYL1Q8N7R7 359 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 C7orf31Q8N865 590 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 DNAAF3Q8N9W5 541 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 CCNYQ8ND76 341 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 MAGEB5Q9BZ81 275 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 BRD8Q9H0E9 1235 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 ARMC7Q9H6L4 198 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 FAM49BQ9NUQ9 324 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 GTF2IRD1Q9UHL9 959 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 SNX9Q9Y5X1 595 aa15.57■□□□□ 0.08
LIMS2-205ENST00000409455 C17orf102A2RUQ5 167 aa15.56■□□□□ 0.08
LIMS2-205ENST00000409455 TMEM233B4DJY2 109 aa15.56■□□□□ 0.08
LIMS2-205ENST00000409455 CFAP99D6REC4 459 aa15.56■□□□□ 0.08
LIMS2-205ENST00000409455 SDHDO14521 159 aa15.56■□□□□ 0.08
LIMS2-205ENST00000409455 SNAP91O60641 907 aa15.56■□□□□ 0.08
LIMS2-205ENST00000409455 SBK3P0C264 359 aa15.56■□□□□ 0.08
LIMS2-205ENST00000409455 CD247P20963 164 aa15.56■□□□□ 0.08
LIMS2-205ENST00000409455 BMXP51813 675 aa15.56■□□□□ 0.08
LIMS2-205ENST00000409455 GJA9P57773 515 aa15.56■□□□□ 0.08
LIMS2-205ENST00000409455 SP3Q02447 781 aa15.56■□□□□ 0.08
LIMS2-205ENST00000409455 FASTKQ14296 549 aaKnown RBP15.56■□□□□ 0.08
LIMS2-205ENST00000409455 SQLEQ14534 574 aa15.56■□□□□ 0.08
LIMS2-205ENST00000409455 JADE1Q6IE81 842 aa15.56■□□□□ 0.08
LIMS2-205ENST00000409455 CXCL17Q6UXB2 119 aa15.56■□□□□ 0.08
LIMS2-205ENST00000409455 CATSPER4Q7RTX7 472 aa15.56■□□□□ 0.08
LIMS2-205ENST00000409455 SLC15A3Q8IY34 581 aa15.56■□□□□ 0.08
LIMS2-205ENST00000409455 TMEM151AQ8N4L1 468 aa15.56■□□□□ 0.08
LIMS2-205ENST00000409455 C12orf29Q8N999 325 aa15.56■□□□□ 0.08
LIMS2-205ENST00000409455 KDM1BQ8NB78 822 aa15.56■□□□□ 0.08
LIMS2-205ENST00000409455 RNF169Q8NCN4 708 aa15.56■□□□□ 0.08
LIMS2-205ENST00000409455 CANT1Q8WVQ1 401 aa15.56■□□□□ 0.08
LIMS2-205ENST00000409455 TMEM40Q8WWA1 233 aa15.56■□□□□ 0.08
LIMS2-205ENST00000409455 KHSRPQ92945 711 aaKnown RBP eCLIP15.56■□□□□ 0.08
LIMS2-205ENST00000409455 NT5C1AQ9BXI3 368 aa15.56■□□□□ 0.08
LIMS2-205ENST00000409455 RNF186Q9NXI6 227 aa15.56■□□□□ 0.08
LIMS2-205ENST00000409455 CCDC167Q9P0B6 97 aa15.56■□□□□ 0.08
LIMS2-205ENST00000409455 TMEM9Q9P0T7 183 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms