RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 CALR3Q96L12 384 aaKnown RBP18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 ZNF830Q96NB3 372 aaPredicted RBP18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 TSGA13Q96PP4 275 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 NUDCD1Q96RS6 583 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 C1QTNF2Q9BXJ5 285 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 LACRTQ9GZZ8 138 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 NT5MQ9NPB1 228 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 GDF3Q9NR23 364 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 DTLQ9NZJ0 730 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 HEY1Q9Y5J3 304 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 DCHS1Q96JQ0 3298 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 DOCK9Q9BZ29 2069 aa18.11■□□□□ 0.49
PDLIM2-206ENST00000409141 BTNL10A8MVZ5 291 aa18.1■□□□□ 0.49
PDLIM2-206ENST00000409141 DFNA5O60443 496 aa18.1■□□□□ 0.49
PDLIM2-206ENST00000409141 MMP20O60882 483 aa18.1■□□□□ 0.49
PDLIM2-206ENST00000409141 ZFXP17010 805 aaPredicted RBP18.1■□□□□ 0.49
PDLIM2-206ENST00000409141 NXPH1P58417 271 aa18.1■□□□□ 0.49
PDLIM2-206ENST00000409141 MAXP61244 160 aa18.1■□□□□ 0.49
PDLIM2-206ENST00000409141 POLR2LP62875 67 aaKnown RBP18.1■□□□□ 0.49
PDLIM2-206ENST00000409141 ITKQ08881 620 aa18.1■□□□□ 0.49
PDLIM2-206ENST00000409141 FGL2Q14314 439 aa18.1■□□□□ 0.49
PDLIM2-206ENST00000409141 ZNF423Q2M1K9 1284 aa18.1■□□□□ 0.49
PDLIM2-206ENST00000409141 ERAP2Q6P179 960 aa18.1■□□□□ 0.49
PDLIM2-206ENST00000409141 PIP4P1Q86T03 277 aa18.1■□□□□ 0.49
PDLIM2-206ENST00000409141 TEX26Q8N6G2 289 aa18.1■□□□□ 0.49
PDLIM2-206ENST00000409141 TMEM145Q8NBT3 493 aa18.1■□□□□ 0.49
PDLIM2-206ENST00000409141 LRRN4Q8WUT4 740 aa18.1■□□□□ 0.49
PDLIM2-206ENST00000409141 NSMCE3Q96MG7 304 aa18.1■□□□□ 0.49
PDLIM2-206ENST00000409141 MGME1Q9BQP7 344 aa18.1■□□□□ 0.49
PDLIM2-206ENST00000409141 NOD2Q9HC29 1040 aa18.1■□□□□ 0.49
PDLIM2-206ENST00000409141 PCDH12Q9NPG4 1184 aa18.1■□□□□ 0.49
PDLIM2-206ENST00000409141 DNAH14Q0VDD8 3507 aa18.1■□□□□ 0.49
PDLIM2-206ENST00000409141 TRPM6Q9BX84 2022 aa18.1■□□□□ 0.49
PDLIM2-206ENST00000409141 GIPC1O14908 333 aa18.09■□□□□ 0.49
PDLIM2-206ENST00000409141 PJA2O43164 708 aa18.09■□□□□ 0.49
PDLIM2-206ENST00000409141 SH3BP5O60239 455 aa18.09■□□□□ 0.49
PDLIM2-206ENST00000409141 NEBLO76041 1014 aa18.09■□□□□ 0.49
PDLIM2-206ENST00000409141 CEACAM1P13688 526 aa18.09■□□□□ 0.49
PDLIM2-206ENST00000409141 CR2P20023 1033 aa18.09■□□□□ 0.49
PDLIM2-206ENST00000409141 CLDN2P57739 230 aa18.09■□□□□ 0.49
PDLIM2-206ENST00000409141 GSDMDP57764 484 aa18.09■□□□□ 0.49
PDLIM2-206ENST00000409141 DYNLT1P63172 113 aa18.09■□□□□ 0.49
PDLIM2-206ENST00000409141 FOXK2Q01167 660 aa18.09■□□□□ 0.49
PDLIM2-206ENST00000409141 SUZ12Q15022 739 aaKnown RBP18.09■□□□□ 0.49
PDLIM2-206ENST00000409141 TMEM52BQ4KMG9 183 aa18.09■□□□□ 0.49
PDLIM2-206ENST00000409141 ZSWIM9Q86XI8 627 aa18.09■□□□□ 0.49
PDLIM2-206ENST00000409141 TXLNBQ8N3L3 684 aa18.09■□□□□ 0.49
PDLIM2-206ENST00000409141 ASB12Q8WXK4 309 aa18.09■□□□□ 0.49
PDLIM2-206ENST00000409141 ELF4Q99607 663 aaPredicted RBP18.09■□□□□ 0.49
PDLIM2-206ENST00000409141 WRAP53Q9BUR4 548 aaKnown RBP18.09■□□□□ 0.49
PDLIM2-206ENST00000409141 PCDHGC4Q9Y5F7 938 aa18.09■□□□□ 0.49
PDLIM2-206ENST00000409141 HS3ST3A1Q9Y663 406 aa18.09■□□□□ 0.49
PDLIM2-206ENST00000409141 TRAFD1O14545 582 aaPredicted RBP18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 RIOK3O14730 519 aaKnown RBP18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 RAD51BO15315 384 aa18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 TM7SF2O76062 418 aa18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 ZRANB2O95218 330 aaKnown RBP eCLIP18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 PRKCGP05129 697 aa18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 THEGLP0DJG4 465 aa18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 CCNB1P14635 433 aa18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 CDKN2BP42772 138 aa18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 CCT8P50990 548 aa18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 FAM193AP78312 1265 aa18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 RALGPS1Q5JS13 557 aa18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 NPNTQ6UXI9 565 aa18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 SPOCD1Q6ZMY3 1216 aa18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 SPATS2Q86XZ4 545 aaKnown RBP18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 CCDC13Q8IYE1 715 aa18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 KATNAL2Q8IYT4 538 aa18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 RCOR2Q8IZ40 523 aa18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 KIAA1524Q8TCG1 905 aa18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 SETD7Q8WTS6 366 aaKnown RBP18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 PDCD6IPQ8WUM4 868 aaKnown RBP18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 MAML1Q92585 1016 aa18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 FATE1Q969F0 183 aa18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 HDAC11Q96DB2 347 aa18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 ECHDC3Q96DC8 303 aa18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 LENG8Q96PV6 779 aaPredicted RBP18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 LGMNQ99538 433 aa18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 DESI2Q9BSY9 194 aa18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 HAUS2Q9NVX0 235 aa18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 RBM22Q9NW64 420 aaKnown RBP eCLIP18.08■□□□□ 0.494e-6■■■■□ 24.3
PDLIM2-206ENST00000409141 ATP8A1Q9Y2Q0 1164 aa18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 PCDHGB2Q9Y5G2 931 aa18.08■□□□□ 0.49
PDLIM2-206ENST00000409141 CABIN1Q9Y6J0 2220 aa18.08■□□□□ 0.48
PDLIM2-206ENST00000409141 A0A1B0GTQ1 180 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 MED19A0JLT2 244 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 FPGTO14772 594 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 KRT10P13645 584 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 ARRB1P49407 418 aaPredicted RBP18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 IL9RQ01113 521 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 KIF5AQ12840 1032 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 TFDP2Q14188 446 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 PDK1Q15118 436 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 LLGL1Q15334 1064 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 KAZNQ674X7 775 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 GCNT7Q6ZNI0 430 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 CCDC50Q8IVM0 306 aa18.07■□□□□ 0.48
PDLIM2-206ENST00000409141 NAXDQ8IW45 347 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms