RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 LRMDAQ9H2I8 198 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 NPHS2Q9NP85 383 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 SLCO1B3Q9NPD5 702 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 CASS4Q9NQ75 786 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 ASAH2Q9NR71 780 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 LNPEPQ9UIQ6 1025 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 ZMIZ1Q9ULJ6 1067 aa13.07□□□□□ -0.32
SMARCB1-203ENST00000407082 FASNP49327 2511 aaKnown RBP13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 FAM237BA0A1B0GVD1 139 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 SHISA7A6NL88 538 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 TRAFD1O14545 582 aaPredicted RBP13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 TIMM44O43615 452 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 FOXD2O60548 495 aaPredicted RBP13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 H2AFYO75367 372 aaKnown RBP13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 HAUS5O94927 633 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 ATP6V1G2O95670 118 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 APOA4P06727 396 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 BPGMP07738 259 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 MYL4P12829 197 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 GRK2P25098 689 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 PTPN3P26045 913 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 MGAT1P26572 445 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 YWHAQP27348 245 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 PTPN4P29074 926 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 EPHB2P29323 1055 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 GDI1P31150 447 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 CCR1P32246 355 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 CSE1LP55060 971 aaKnown RBP13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 SESN2P58004 480 aaPredicted RBP13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 USP46P62068 366 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 SHC2P98077 582 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 NRG1Q02297 640 aaPredicted RBP13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 NIPAL4Q0D2K0 466 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 SF3A3Q12874 501 aaKnown RBP eCLIP13.06□□□□□ -0.321e-6■■■■□ 22.8
SMARCB1-203ENST00000407082 STX3Q13277 289 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 CRYMQ14894 314 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 KRT72Q14CN4 511 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 SPRED3Q2MJR0 410 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 ANO4Q32M45 955 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 FAM91A1Q658Y4 838 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 GPRIN1Q7Z2K8 1008 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 RASSF3Q86WH2 238 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 TMC8Q8IU68 726 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 WDR75Q8IWA0 830 aaKnown RBP13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 ZNF276Q8N554 614 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 FAM160A2Q8N612 972 aaPredicted RBP13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 LEMD2Q8NC56 503 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 PPP4R1Q8TF05 950 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 DNASE1L2Q92874 299 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 ELSPBP1Q96BH3 223 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 TRMT2BQ96GJ1 504 aaKnown RBP13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 OXNAD1Q96HP4 312 aaPredicted RBP13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 MYRFLQ96LU7 910 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 TSNARE1Q96NA8 513 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 TTLL2Q9BWV7 592 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 LRRC3Q9BY71 257 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 ARRDC1-AS1Q9H2J1 176 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 FBXO44Q9H4M3 255 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 ZFP14Q9HCL3 533 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 ZNF334Q9HCZ1 680 aaPredicted RBP13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 THAP1Q9NVV9 213 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 COMMD8Q9NX08 183 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 ARHGEF38Q9NXL2 777 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 GDE1Q9NZC3 331 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 SIRPGQ9P1W8 387 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 UXTQ9UBK9 157 aaPredicted RBP13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 BAIAP2L1Q9UHR4 511 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 VANGL2Q9ULK5 521 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 CHKBQ9Y259 395 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 PIAS3Q9Y6X2 628 aa13.06□□□□□ -0.32
SMARCB1-203ENST00000407082 ARHGAP42A6NI28 874 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 CXorf49A8MYA2 514 aaPredicted RBP13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 C1QTNF9BB2RNN3 333 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 ZNF197O14709 1029 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 NEBLO76041 1014 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 FGF19O95750 216 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 C1QTNF9P0C862 333 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 CEBPBP17676 345 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 BGNP21810 368 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 GABRR2P28476 465 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 SERPINB8P50452 374 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 PRKAA2P54646 552 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 EPHA5P54756 1037 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 GEMP55040 296 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 CDH17Q12864 832 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 TAF10Q12962 218 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 UGP2Q16851 508 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 SLC5A9Q2M3M2 681 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 MROH9Q5TGP6 573 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 GAREM2Q75VX8 874 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 PTCD2Q8WV60 388 aaKnown RBP13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 IRF7Q92985 503 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 FBXO32Q969P5 355 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 TBC1D31Q96DN5 1066 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 TCEAL4Q96EI5 215 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 CERS2Q96G23 380 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 NSL1Q96IY1 281 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 TEKT5Q96M29 485 aa13.05□□□□□ -0.32
SMARCB1-203ENST00000407082 SERPINB11Q96P15 392 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms