RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 DEF8Q6ZN54 512 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 MAATS1Q7Z4T9 603 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 WDR5BQ86VZ2 330 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 ANKRD13BQ86YJ7 626 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 TSPYL6Q8N831 410 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 ZNF366Q8N895 744 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 DNAAF1Q8NEP3 725 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 PRSS3P2Q8NHM4 247 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 MSI2Q96DH6 328 aaKnown RBP5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 CLMNQ96JQ2 1002 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 USP44Q9H0E7 712 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 SLC25A18Q9H1K4 315 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 JMJD4Q9H9V9 463 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 SMC4Q9NTJ3 1288 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 ZDHHC7Q9NXF8 308 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 SLC25A10Q9UBX3 287 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 PNMA2Q9UL42 364 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 CNPY2Q9Y2B0 182 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 CRB1P82279 1406 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 LRP6O75581 1613 aa5.3□□□□□ -1.56
HMGB3P19-201ENST00000403971 PABPN1LA6NDY0 278 aaKnown RBP5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 TMEM247A6NEH6 219 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 DDTLA6NHG4 134 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 PRPF4O43172 522 aaKnown RBP eCLIP5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 HTATSF1O43719 755 aaKnown RBP5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 F9P00740 461 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 TMPOP42166 694 aaKnown RBP5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 GPD2P43304 727 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 TMPRSS3P57727 454 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 GAD2Q05329 585 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 LMOD3Q0VAK6 560 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 MTX1Q13505 466 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 KLF9Q13886 244 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 CAMK1Q14012 370 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 ME3Q16798 604 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 PIK3CD-AS1Q5SR53 167 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 TTC39AQ5SRH9 613 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 C6orf10Q5SRN2 563 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 C10orf25Q5T742 122 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 TBC1D9BQ66K14 1250 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 C17orf99Q6UX52 265 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 MOB3CQ70IA8 216 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 GPSM1Q86YR5 675 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 WDR63Q8IWG1 891 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 LRRC57Q8N9N7 239 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 TNIP2Q8NFZ5 429 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 TEFMQ96QE5 360 aaKnown RBP5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 ATP8A2Q9NTI2 1148 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 BEX4Q9NWD9 120 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 TRNAU1APQ9NX07 287 aaKnown RBP5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 GRHL1Q9NZI5 618 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 PEMTQ9UBM1 199 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 COG5Q9UP83 839 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 CAMK2AQ9UQM7 478 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 NAALADL1Q9UQQ1 740 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 LRRC37A3O60309 1634 aa5.29□□□□□ -1.56
HMGB3P19-201ENST00000403971 IL16Q14005 1332 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 ITGB4P16144 1822 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 WDR91A4D1P6 747 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 ZNF814B7Z6K7 855 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 TEX22C9J3V5 150 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 CNOT3O75175 753 aaKnown RBP5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 TMCC1O94876 653 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 SERPINC1P01008 464 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 IL1AP01583 271 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 LCKP06239 509 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 CENPBP07199 599 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 SLC16A2P36021 539 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 PAFAH1B1P43034 410 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 SSBP2P81877 361 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 TRIP6Q15654 476 aaKnown RBP5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 PRICKLE4Q2TBC4 344 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 PLEKHO1Q53GL0 409 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 COLEC12Q5KU26 742 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 MORN5Q5VZ52 161 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 SHC4Q6S5L8 630 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 TOM1L2Q6ZVM7 507 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 KDELC2Q7Z4H8 507 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 IGFN1Q86VF2 1251 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 CPXM2Q8N436 756 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 SLC25A41Q8N5S1 370 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 SLC44A5Q8NCS7 719 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 HDAC7Q8WUI4 952 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 COQ8BQ96D53 544 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 KIF1BPQ96EK5 621 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 HEMGNQ9BXL5 484 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 SPRTNQ9H040 489 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 HEY2Q9UBP5 337 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 BTBD3Q9Y2F9 522 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 OVOS2A0A0G2JMS6 1433 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 DISP2A7MBM2 1401 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 ZMYM2Q9UBW7 1377 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 MEGF6O75095 1541 aa5.28□□□□□ -1.56
HMGB3P19-201ENST00000403971 BCL9LQ86UU0 1499 aa5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 KDM3BQ7LBC6 1761 aa5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 GOLGA6L10A0A0M3HER8 536 aa5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 C17orf113A0A1B0GUU1 675 aa5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 B4E171 279 aa5.27□□□□□ -1.57
HMGB3P19-201ENST00000403971 TLX3O43711 291 aaPredicted RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms