RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 DNTTIP2Q5QJE6 756 aaKnown RBP16.08■□□□□ 0.16
HMGA1-204ENST00000401473 PIP5KL1Q5T9C9 394 aa16.08■□□□□ 0.16
HMGA1-204ENST00000401473 ITPRIPL1Q6GPH6 555 aa16.08■□□□□ 0.16
HMGA1-204ENST00000401473 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.08■□□□□ 0.16
HMGA1-204ENST00000401473 KLHDC8BQ8IXV7 354 aa16.08■□□□□ 0.16
HMGA1-204ENST00000401473 FAM131CQ96AQ9 280 aa16.08■□□□□ 0.16
HMGA1-204ENST00000401473 SMIM14Q96QK8 99 aa16.08■□□□□ 0.16
HMGA1-204ENST00000401473 PAK5Q9P286 719 aa16.08■□□□□ 0.16
HMGA1-204ENST00000401473 INVSQ9Y283 1065 aa16.08■□□□□ 0.16
HMGA1-204ENST00000401473 AXIN1O15169 862 aa16.07■□□□□ 0.16
HMGA1-204ENST00000401473 TTI1O43156 1089 aa16.07■□□□□ 0.16
HMGA1-204ENST00000401473 SOCS5O75159 536 aa16.07■□□□□ 0.16
HMGA1-204ENST00000401473 RNASEH2AO75792 299 aaKnown RBP16.07■□□□□ 0.16
HMGA1-204ENST00000401473 PGLSO95336 258 aa16.07■□□□□ 0.16
HMGA1-204ENST00000401473 ACSL1P33121 698 aa16.07■□□□□ 0.16
HMGA1-204ENST00000401473 VPS41P49754 854 aa16.07■□□□□ 0.16
HMGA1-204ENST00000401473 WNT3AP56704 352 aa16.07■□□□□ 0.16
HMGA1-204ENST00000401473 TAS2R38P59533 333 aa16.07■□□□□ 0.16
HMGA1-204ENST00000401473 UGP2Q16851 508 aa16.07■□□□□ 0.16
HMGA1-204ENST00000401473 AGBL4Q5VU57 503 aa16.07■□□□□ 0.16
HMGA1-204ENST00000401473 KCTD11Q693B1 232 aa16.07■□□□□ 0.16
HMGA1-204ENST00000401473 TTC7BQ86TV6 843 aa16.07■□□□□ 0.16
HMGA1-204ENST00000401473 FAM124AQ86V42 546 aa16.07■□□□□ 0.16
HMGA1-204ENST00000401473 PIH1D2Q8WWB5 315 aa16.07■□□□□ 0.16
HMGA1-204ENST00000401473 SPOCK2Q92563 424 aa16.07■□□□□ 0.16
HMGA1-204ENST00000401473 TRIB3Q96RU7 358 aa16.07■□□□□ 0.16
HMGA1-204ENST00000401473 OMDQ99983 421 aa16.07■□□□□ 0.16
HMGA1-204ENST00000401473 HDAC8Q9BY41 377 aa16.07■□□□□ 0.16
HMGA1-204ENST00000401473 PCDH9Q9HC56 1237 aa16.07■□□□□ 0.16
HMGA1-204ENST00000401473 RAB6BQ9NRW1 208 aa16.07■□□□□ 0.16
HMGA1-204ENST00000401473 DKK3Q9UBP4 350 aa16.07■□□□□ 0.16
HMGA1-204ENST00000401473 SCML1Q9UN30 329 aa16.07■□□□□ 0.16
HMGA1-204ENST00000401473 CCDC163A0A0D9SF12 145 aa16.06■□□□□ 0.16
HMGA1-204ENST00000401473 LOC285095A0A1B0GVY8 99 aa16.06■□□□□ 0.16
HMGA1-204ENST00000401473 ECEL1O95672 775 aa16.06■□□□□ 0.16
HMGA1-204ENST00000401473 PRKCGP05129 697 aa16.06■□□□□ 0.16
HMGA1-204ENST00000401473 ACTN2P35609 894 aa16.06■□□□□ 0.16
HMGA1-204ENST00000401473 CKAP4Q07065 602 aaKnown RBP16.06■□□□□ 0.16
HMGA1-204ENST00000401473 MAP7D1Q3KQU3 841 aa16.06■□□□□ 0.16
HMGA1-204ENST00000401473 ZNF528Q3MIS6 628 aa16.06■□□□□ 0.16
HMGA1-204ENST00000401473 USP30Q70CQ3 517 aa16.06■□□□□ 0.16
HMGA1-204ENST00000401473 ERN2Q76MJ5 926 aaKnown RBP16.06■□□□□ 0.16
HMGA1-204ENST00000401473 PDCD7Q8N8D1 485 aaKnown RBP16.06■□□□□ 0.16
HMGA1-204ENST00000401473 HCAR2Q8TDS4 363 aa16.06■□□□□ 0.16
HMGA1-204ENST00000401473 GRK7Q8WTQ7 553 aa16.06■□□□□ 0.16
HMGA1-204ENST00000401473 L2HGDHQ9H9P8 463 aa16.06■□□□□ 0.16
HMGA1-204ENST00000401473 VPS45Q9NRW7 570 aa16.06■□□□□ 0.16
HMGA1-204ENST00000401473 CYP8B1Q9UNU6 501 aa16.06■□□□□ 0.16
HMGA1-204ENST00000401473 TSPAN11A1L157 253 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 SPINT1O43278 529 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 ANXA9O76027 345 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 AGTP01019 485 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 IGLV3-19P01714 112 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 ADRB3P13945 408 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 ADRA1AP35348 466 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 ABL2P42684 1182 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 DR1Q01658 176 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 SEMG2Q02383 582 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 CDK18Q07002 472 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 GPS1Q13098 491 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 SRSF5Q13243 272 aaKnown RBP16.05■□□□□ 0.16
HMGA1-204ENST00000401473 MPP3Q13368 585 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 SPARCL1Q14515 664 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 ARMC12Q5T9G4 340 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 FBXL19Q6PCT2 694 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 BRAT1Q6PJG6 821 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 RANBP10Q6VN20 620 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 IPMKQ8NFU5 416 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 GANCQ8TET4 914 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 PPP1R16AQ96I34 528 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 CARD6Q9BX69 1037 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 AAR2Q9Y312 384 aaKnown RBP16.05■□□□□ 0.16
HMGA1-204ENST00000401473 IGHV1OR15-9A0A0B4J2B8 117 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 A0A0U1RQS6 177 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 ANKRD66B4E2M5 251 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 RAD51CO43502 376 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 USP12O75317 370 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 GAS8O95995 478 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 IVDP26440 423 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 CHRNA4P43681 627 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 TERF1P54274 439 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 SLC14A2Q15849 920 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 TTC31Q49AM3 519 aaPredicted RBP16.05■□□□□ 0.16
HMGA1-204ENST00000401473 JAMLQ86YT9 394 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 NOA1Q8NC60 698 aaKnown RBP16.05■□□□□ 0.16
HMGA1-204ENST00000401473 ZBTB44Q8NCP5 570 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 DYRK4Q9NR20 520 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 WSB2Q9NYS7 404 aaPredicted RBP16.05■□□□□ 0.16
HMGA1-204ENST00000401473 RAPGEFL1Q9UHV5 662 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 GGT7Q9UJ14 662 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 PPIL1Q9Y3C6 166 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 LRRK1Q38SD2 2015 aa16.05■□□□□ 0.16
HMGA1-204ENST00000401473 CEP192Q8TEP8 1941 aa16.04■□□□□ 0.16
HMGA1-204ENST00000401473 PLXND1Q9Y4D7 1925 aa16.04■□□□□ 0.16
HMGA1-204ENST00000401473 TCRBV7S3A2A0A539 114 aa16.04■□□□□ 0.16
HMGA1-204ENST00000401473 ZNF217O75362 1048 aa16.04■□□□□ 0.16
HMGA1-204ENST00000401473 GRIA1P42261 906 aa16.04■□□□□ 0.16
HMGA1-204ENST00000401473 NEK3P51956 506 aa16.04■□□□□ 0.16
HMGA1-204ENST00000401473 GEMP55040 296 aa16.04■□□□□ 0.16
HMGA1-204ENST00000401473 SEMA5AQ13591 1074 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms