RNA–Protein interactions for RNA: ENST00000397709.1

MAP1LC3A-203, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MAP1LC3A, Length 698 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-203ENST00000397709 MID1O15344 667 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 SEC31AO94979 1220 aaKnown RBP19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 APRTP07741 180 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 PDHA1P08559 390 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 ATXN1LP0C7T5 689 aaKnown RBP19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 C5AR1P21730 350 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 SLC8A1P32418 973 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 LMAN1P49257 510 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 CCR3P51677 355 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 TERF1P54274 439 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 ZBTB16Q05516 673 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 OLIG2Q13516 323 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 SPARCL1Q14515 664 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 POM121L1PQ3SYA9 428 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 TEX35Q5T0J7 233 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 SYCP2LQ5T4T6 812 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 ANKRD22Q5VYY1 191 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 CCDC70Q6NSX1 233 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 BRAT1Q6PJG6 821 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 RANBP10Q6VN20 620 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 PCGF5Q86SE9 256 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 PPIL6Q8IXY8 311 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 TMEM105Q8N8V8 129 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 NAT8LQ8N9F0 302 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 PDCD6IPQ8WUM4 868 aaKnown RBP19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 SIPA1Q96FS4 1042 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 IFT43Q96FT9 208 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 PPP1R16AQ96I34 528 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 HHIPQ96QV1 700 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 TBL1YQ9BQ87 522 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 DPH5Q9H2P9 285 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 PABPC3Q9H361 631 aaKnown RBP19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 WHRNQ9P202 907 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 PCDHB9Q9Y5E1 797 aa19.62■□□□□ 0.73
MAP1LC3A-203ENST00000397709 C16orf96A6NNT2 1141 aa19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 TMEM63AO94886 807 aa19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 NDST3O95803 873 aa19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 CPP00450 1065 aa19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 AGTP01019 485 aa19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 CXCL12P48061 93 aa19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 DRG2P55039 364 aaKnown RBP19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 RPL26P61254 145 aaKnown RBP19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 TUBB4BP68371 445 aa19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 CDK16Q00536 496 aa19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 NAPEPLDQ6IQ20 393 aa19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 PARS2Q7L3T8 475 aaKnown RBP19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 HOOK3Q86VS8 718 aa19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 RASSF3Q86WH2 238 aa19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 CACUL1Q86Y37 369 aa19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 FBXL6Q8N531 539 aa19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 AADATQ8N5Z0 425 aa19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 BBOF1Q8ND07 529 aa19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 HMGB4Q8WW32 186 aa19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 PIH1D2Q8WWB5 315 aa19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 PRCCQ92733 491 aaPredicted RBP19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 FSD1LQ9BXM9 530 aa19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 HDAC8Q9BY41 377 aa19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 GRHL1Q9NZI5 618 aa19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 SCML1Q9UN30 329 aa19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 RPL26L1Q9UNX3 145 aaKnown RBP19.61■□□□□ 0.73
MAP1LC3A-203ENST00000397709 NDC80O14777 642 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 TP73O15350 636 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 USP12O75317 370 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 ALDH1A2O94788 518 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 APBB3O95704 486 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 DNTTP04053 509 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 RHOXF2BP0C7M4 288 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 TIMP2P16035 220 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 ITIH2P19823 946 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 HLA-DPA1P20036 260 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 DRD3P35462 400 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 GUCY2DQ02846 1103 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 GALNT3Q14435 633 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 MORF4L2Q15014 288 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 SLC1A5Q15758 541 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 CFAP58Q5T655 872 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 DENND5AQ6IQ26 1287 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 HIBCHQ6NVY1 386 aaPredicted RBP19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 KDELC2Q7Z4H8 507 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 LINC00523Q86TU6 105 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 CAMKK1Q8N5S9 505 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 MCUQ8NE86 351 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 LPCAT1Q8NF37 534 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 MDGA1Q8NFP4 955 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 FAM131CQ96AQ9 280 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 APOL2Q9BQE5 337 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 RHOXF2Q9BQY4 288 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 ADGRE3Q9BY15 652 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 DYRK4Q9NR20 520 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 SPATA6Q9NWH7 488 aaPredicted RBP19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 PHTF1Q9UMS5 762 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 SHOC2Q9UQ13 582 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 PPIL1Q9Y3C6 166 aa19.6■□□□□ 0.73
MAP1LC3A-203ENST00000397709 ESYT3A0FGR9 886 aa19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 UPK3BL1B0FP48 263 aa19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 UPK3BL2E5RIL1 263 aa19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 K7ESF4 209 aa19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 SMAPO00193 183 aa19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 FGF1P05230 155 aa19.59■□□□□ 0.73
MAP1LC3A-203ENST00000397709 GRIA1P42261 906 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms