RNA–Protein interactions for RNA: ENST00000397345.7

NEB-203, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-203ENST00000397345 LAMC3Q9Y6N6 1575 aa2.56□□□□□ -2
NEB-203ENST00000397345 PRORSD1PA6NEY8 169 aa2.56□□□□□ -2
NEB-203ENST00000397345 FARP2O94887 1054 aaPredicted RBP2.56□□□□□ -2
NEB-203ENST00000397345 GABPAQ06546 454 aa2.56□□□□□ -2
NEB-203ENST00000397345 TLDC1Q6P9B6 456 aa2.56□□□□□ -2
NEB-203ENST00000397345 LRRC74BQ6ZQY2 392 aa2.56□□□□□ -2
NEB-203ENST00000397345 KRT77Q7Z794 578 aa2.56□□□□□ -2
NEB-203ENST00000397345 SLITRK2Q9H156 845 aa2.56□□□□□ -2
NEB-203ENST00000397345 ACTR3BQ9P1U1 418 aa2.56□□□□□ -2
NEB-203ENST00000397345 GIT1Q9Y2X7 761 aa2.56□□□□□ -2
NEB-203ENST00000397345 BTN3A3O00478 584 aa2.56□□□□□ -2
NEB-203ENST00000397345 HNRNPDLO14979 420 aaKnown RBP2.56□□□□□ -2
NEB-203ENST00000397345 PIGNO95427 931 aa2.56□□□□□ -2
NEB-203ENST00000397345 PBX3P40426 434 aa2.56□□□□□ -2
NEB-203ENST00000397345 RBBP4Q09028 425 aa2.56□□□□□ -2
NEB-203ENST00000397345 NEDD8Q15843 81 aa2.56□□□□□ -2
NEB-203ENST00000397345 PSMD5Q16401 504 aa2.56□□□□□ -2
NEB-203ENST00000397345 SLFN13Q68D06 897 aa2.56□□□□□ -2
NEB-203ENST00000397345 AMIGO2Q86SJ2 522 aa2.56□□□□□ -2
NEB-203ENST00000397345 SSX3Q99909 188 aa2.56□□□□□ -2
NEB-203ENST00000397345 VTA1Q9NP79 307 aa2.56□□□□□ -2
NEB-203ENST00000397345 INTS13Q9NVM9 706 aa2.56□□□□□ -2
NEB-203ENST00000397345 GPN3Q9UHW5 284 aaPredicted RBP2.56□□□□□ -2
NEB-203ENST00000397345 ZNF223Q9UK11 482 aaPredicted RBP2.56□□□□□ -2
NEB-203ENST00000397345 POLHQ9Y253 713 aa2.56□□□□□ -2
NEB-203ENST00000397345 A3GALT2U3KPV4 340 aa2.56□□□□□ -2
NEB-203ENST00000397345 CCDC154A6NI56 674 aa2.56□□□□□ -2
NEB-203ENST00000397345 B4GALT4O60513 344 aa2.56□□□□□ -2
NEB-203ENST00000397345 FECHP22830 423 aa2.56□□□□□ -2
NEB-203ENST00000397345 GTF2IP78347 998 aa2.56□□□□□ -2
NEB-203ENST00000397345 ROR1Q01973 937 aa2.56□□□□□ -2
NEB-203ENST00000397345 RBFAQ8N0V3 343 aa2.56□□□□□ -2
NEB-203ENST00000397345 FTMTQ8N4E7 242 aa2.56□□□□□ -2
NEB-203ENST00000397345 C10orf53Q8N6V4 93 aa2.56□□□□□ -2
NEB-203ENST00000397345 TSEN2Q8NCE0 465 aaKnown RBP2.56□□□□□ -2
NEB-203ENST00000397345 ADAM32Q8TC27 787 aa2.56□□□□□ -2
NEB-203ENST00000397345 PCNPQ8WW12 178 aaKnown RBP2.56□□□□□ -2
NEB-203ENST00000397345 ELMO2Q96JJ3 720 aa2.56□□□□□ -2
NEB-203ENST00000397345 C3orf14Q9HBI5 128 aa2.56□□□□□ -2
NEB-203ENST00000397345 GJB4Q9NTQ9 266 aa2.56□□□□□ -2
NEB-203ENST00000397345 FADS3Q9Y5Q0 445 aa2.56□□□□□ -2
NEB-203ENST00000397345 ZNF532Q9HCE3 1301 aa2.56□□□□□ -2
NEB-203ENST00000397345 PRSS44E7EML9 344 aa2.56□□□□□ -2
NEB-203ENST00000397345 H3BNH8 94 aa2.56□□□□□ -2
NEB-203ENST00000397345 TRIM3O75382 744 aaPredicted RBP2.56□□□□□ -2
NEB-203ENST00000397345 LRG1P02750 347 aa2.56□□□□□ -2
NEB-203ENST00000397345 CXCR4P61073 352 aa2.56□□□□□ -2
NEB-203ENST00000397345 GALK2Q01415 458 aa2.56□□□□□ -2
NEB-203ENST00000397345 PTPN11Q06124 597 aaPredicted RBP2.56□□□□□ -2
NEB-203ENST00000397345 ZNF211Q13398 564 aaPredicted RBP2.56□□□□□ -2
NEB-203ENST00000397345 ILDR2Q71H61 639 aa2.56□□□□□ -2
NEB-203ENST00000397345 CCDC60Q8IWA6 550 aaPredicted RBP2.56□□□□□ -2
NEB-203ENST00000397345 TMEM120AQ9BXJ8 343 aa2.56□□□□□ -2
NEB-203ENST00000397345 CATSPERZQ9NTU4 200 aa2.56□□□□□ -2
NEB-203ENST00000397345 HPS5Q9UPZ3 1129 aa2.56□□□□□ -2
NEB-203ENST00000397345 AURKCQ9UQB9 309 aa2.56□□□□□ -2
NEB-203ENST00000397345 KDM4BO94953 1096 aa2.56□□□□□ -2
NEB-203ENST00000397345 FGFR4P22455 802 aa2.56□□□□□ -2
NEB-203ENST00000397345 MMP13P45452 471 aa2.56□□□□□ -2
NEB-203ENST00000397345 ZNF157P51786 506 aaPredicted RBP2.56□□□□□ -2
NEB-203ENST00000397345 PPATQ06203 517 aa2.56□□□□□ -2
NEB-203ENST00000397345 ARMC6Q6NXE6 501 aa2.56□□□□□ -2
NEB-203ENST00000397345 CYP20A1Q6UW02 462 aa2.56□□□□□ -2
NEB-203ENST00000397345 BPHLQ86WA6 291 aaPredicted RBP2.56□□□□□ -2
NEB-203ENST00000397345 GRIN3AQ8TCU5 1115 aa2.56□□□□□ -2
NEB-203ENST00000397345 PYDC1Q8WXC3 89 aa2.56□□□□□ -2
NEB-203ENST00000397345 NEU2Q9Y3R4 380 aa2.56□□□□□ -2
NEB-203ENST00000397345 PCDHA3Q9Y5H8 950 aa2.56□□□□□ -2
NEB-203ENST00000397345 PQBP1O60828 265 aaKnown RBP2.55□□□□□ -2
NEB-203ENST00000397345 CYP7B1O75881 506 aa2.55□□□□□ -2
NEB-203ENST00000397345 MAP3K6O95382 1288 aa2.55□□□□□ -2
NEB-203ENST00000397345 BCL10O95999 233 aa2.55□□□□□ -2
NEB-203ENST00000397345 SERPINA3P01011 423 aa2.55□□□□□ -2
NEB-203ENST00000397345 HLA-DPA1P20036 260 aa2.55□□□□□ -2
NEB-203ENST00000397345 PDHA2P29803 388 aa2.55□□□□□ -2
NEB-203ENST00000397345 PTPN7P35236 360 aa2.55□□□□□ -2
NEB-203ENST00000397345 GEMP55040 296 aa2.55□□□□□ -2
NEB-203ENST00000397345 NOMO3P69849 1222 aa2.55□□□□□ -2
NEB-203ENST00000397345 SLC29A2Q14542 456 aa2.55□□□□□ -2
NEB-203ENST00000397345 NOMO1Q15155 1222 aa2.55□□□□□ -2
NEB-203ENST00000397345 TSNQ15631 228 aaKnown RBP2.55□□□□□ -2
NEB-203ENST00000397345 LIN54Q6MZP7 749 aa2.55□□□□□ -2
NEB-203ENST00000397345 C1orf94Q6P1W5 598 aa2.55□□□□□ -2
NEB-203ENST00000397345 CES3Q6UWW8 571 aa2.55□□□□□ -2
NEB-203ENST00000397345 NKD2Q969F2 451 aaPredicted RBP2.55□□□□□ -2
NEB-203ENST00000397345 SUCLG2Q96I99 432 aa2.55□□□□□ -2
NEB-203ENST00000397345 FAIM2Q9BWQ8 316 aa2.55□□□□□ -2
NEB-203ENST00000397345 TPK1Q9H3S4 243 aa2.55□□□□□ -2
NEB-203ENST00000397345 PKP3Q9Y446 797 aa2.55□□□□□ -2
NEB-203ENST00000397345 DDX3XO00571 662 aaKnown RBP eCLIP2.55□□□□□ -2
NEB-203ENST00000397345 SYN3O14994 580 aa2.55□□□□□ -2
NEB-203ENST00000397345 POLR1CO15160 346 aaPredicted RBP2.55□□□□□ -2
NEB-203ENST00000397345 IL1BP01584 269 aa2.55□□□□□ -2
NEB-203ENST00000397345 CHRNB3Q05901 458 aa2.55□□□□□ -2
NEB-203ENST00000397345 FAM182BQ5T319 152 aa2.55□□□□□ -2
NEB-203ENST00000397345 CDC73Q6P1J9 531 aa2.55□□□□□ -2
NEB-203ENST00000397345 TMC7Q7Z402 723 aa2.55□□□□□ -2
NEB-203ENST00000397345 GPD1LQ8N335 351 aa2.55□□□□□ -2
NEB-203ENST00000397345 TFB1MQ8WVM0 346 aaKnown RBP2.55□□□□□ -2
NEB-203ENST00000397345 PDCD2LQ9BRP1 358 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms