RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 LZTR1Q8N653 840 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 IRGQQ8WZA9 623 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 ANKRD60Q9BZ19 345 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 TIMM13Q9Y5L4 95 aaPredicted RBP14.04□□□□□ -0.16
NUP98-204ENST00000397004 MAGEB16A2A368 324 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 MYBPHLA2RUH7 354 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 HHLA1C9JL84 531 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 APOA4P06727 396 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 TFPTP0C1Z6 253 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 CD247P20963 164 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 OXTRP30559 389 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 APLP1P51693 650 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 SNX16P57768 344 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 FASTKQ14296 549 aaKnown RBP14.04□□□□□ -0.16
NUP98-204ENST00000397004 CSHL1Q14406 222 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 TECRLQ5HYJ1 363 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 SETD3Q86TU7 594 aaPredicted RBP14.04□□□□□ -0.16
NUP98-204ENST00000397004 KCTD13Q8WZ19 329 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 PHF21BQ96EK2 531 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 DUS3LQ96G46 650 aaKnown RBP14.04□□□□□ -0.16
NUP98-204ENST00000397004 TRPV6Q9H1D0 765 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 MRPL46Q9H2W6 279 aaKnown RBP14.04□□□□□ -0.16
NUP98-204ENST00000397004 TIMMDC1Q9NPL8 285 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 TREX1Q9NSU2 369 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 DDIT4Q9NX09 232 aa14.04□□□□□ -0.16
NUP98-204ENST00000397004 CCL22O00626 93 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 NPHS1O60500 1241 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 ADRA1AP35348 466 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 LDB1Q86U70 411 aaPredicted RBP14.03□□□□□ -0.16
NUP98-204ENST00000397004 ERI1Q8IV48 349 aaKnown RBP14.03□□□□□ -0.16
NUP98-204ENST00000397004 NTAN1Q96AB6 310 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 ZFP42Q96MM3 310 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 PPP2R3BQ9Y5P8 575 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 PSMD12O00232 456 aaPredicted RBP14.03□□□□□ -0.16
NUP98-204ENST00000397004 SLC7A1P30825 629 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 SLC7A2P52569 658 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 NME5P56597 212 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 LPIN1Q14693 890 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 DCAF4L1Q3SXM0 396 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 ITPRIPL1Q6GPH6 555 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 KLC3Q6P597 504 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 IPMKQ8NFU5 416 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 DDI1Q8WTU0 396 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 TKTL2Q9H0I9 626 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 GSTO2Q9H4Y5 243 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 ZNF236Q9UL36 1845 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 LRRC14BA6NHZ5 514 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 NME4O00746 187 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 STMN1P16949 149 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 LARP4Q71RC2 724 aaKnown RBP eCLIP14.03□□□□□ -0.16
NUP98-204ENST00000397004 LPCAT2Q7L5N7 544 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 CUZD1Q86UP6 607 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 SNRNP27Q8WVK2 155 aaKnown RBP14.03□□□□□ -0.16
NUP98-204ENST00000397004 TANKQ92844 425 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 ELMO2Q96JJ3 720 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 OSBPL11Q9BXB4 747 aa14.03□□□□□ -0.16
NUP98-204ENST00000397004 NAA50Q9GZZ1 169 aaKnown RBP14.03□□□□□ -0.16
NUP98-204ENST00000397004 TTC3P53804 2025 aa14.02□□□□□ -0.16
NUP98-204ENST00000397004 PTGESO14684 152 aa14.02□□□□□ -0.16
NUP98-204ENST00000397004 ATE1O95260 518 aa14.02□□□□□ -0.16
NUP98-204ENST00000397004 CLCN2P51788 898 aa14.02□□□□□ -0.16
NUP98-204ENST00000397004 HK2P52789 917 aa14.02□□□□□ -0.16
NUP98-204ENST00000397004 FOXA1P55317 472 aa14.02□□□□□ -0.16
NUP98-204ENST00000397004 DCTN2Q13561 401 aaKnown RBP14.02□□□□□ -0.16
NUP98-204ENST00000397004 XKR4Q5GH76 650 aa14.02□□□□□ -0.16
NUP98-204ENST00000397004 ZNF470Q6ECI4 717 aa14.02□□□□□ -0.16
NUP98-204ENST00000397004 CATSPER4Q7RTX7 472 aa14.02□□□□□ -0.16
NUP98-204ENST00000397004 C2CD4AQ8NCU7 369 aaPredicted RBP14.02□□□□□ -0.16
NUP98-204ENST00000397004 SOX17Q9H6I2 414 aaPredicted RBP14.02□□□□□ -0.16
NUP98-204ENST00000397004 TRIP12Q14669 1992 aaPredicted RBP14.02□□□□□ -0.16
NUP98-204ENST00000397004 TRIM64CA6NLI5 447 aa14.02□□□□□ -0.17
NUP98-204ENST00000397004 ERI2A8K979 691 aaKnown RBP14.02□□□□□ -0.17
NUP98-204ENST00000397004 SLCO1B7G3V0H7 640 aa14.02□□□□□ -0.17
NUP98-204ENST00000397004 FXYD1O00168 92 aa14.02□□□□□ -0.17
NUP98-204ENST00000397004 GABRDO14764 452 aa14.02□□□□□ -0.17
NUP98-204ENST00000397004 SNAI1O95863 264 aaPredicted RBP14.02□□□□□ -0.17
NUP98-204ENST00000397004 GRIA3P42263 894 aa14.02□□□□□ -0.17
NUP98-204ENST00000397004 HSPA13P48723 471 aa14.02□□□□□ -0.17
NUP98-204ENST00000397004 UBQLN1Q9UMX0 589 aaKnown RBP14.02□□□□□ -0.17
NUP98-204ENST00000397004 SAC3D1A6NKF1 404 aa14.02□□□□□ -0.17
NUP98-204ENST00000397004 H0YJX3 145 aa14.02□□□□□ -0.17
NUP98-204ENST00000397004 SLC25A27O95847 323 aa14.02□□□□□ -0.17
NUP98-204ENST00000397004 HCAR3P49019 387 aa14.02□□□□□ -0.17
NUP98-204ENST00000397004 PRKAA2P54646 552 aa14.02□□□□□ -0.17
NUP98-204ENST00000397004 DNAJB13P59910 316 aa14.02□□□□□ -0.17
NUP98-204ENST00000397004 PRAMEP78395 509 aa14.02□□□□□ -0.17
NUP98-204ENST00000397004 PFKPQ01813 784 aa14.02□□□□□ -0.17
NUP98-204ENST00000397004 PPP4R4Q6NUP7 873 aa14.02□□□□□ -0.17
NUP98-204ENST00000397004 FAM35AQ86V20 835 aa14.02□□□□□ -0.17
NUP98-204ENST00000397004 TRIML2Q8N7C3 387 aa14.02□□□□□ -0.17
NUP98-204ENST00000397004 SMG8Q8ND04 991 aaKnown RBP14.02□□□□□ -0.17
NUP98-204ENST00000397004 PCED1BQ96HM7 432 aa14.02□□□□□ -0.17
NUP98-204ENST00000397004 SLC9A7Q96T83 725 aa14.02□□□□□ -0.17
NUP98-204ENST00000397004 GPATCH1Q9BRR8 931 aaKnown RBP14.02□□□□□ -0.17
NUP98-204ENST00000397004 LRRC4Q9HBW1 653 aa14.02□□□□□ -0.17
NUP98-204ENST00000397004 SPAG4Q9NPE6 437 aa14.02□□□□□ -0.17
NUP98-204ENST00000397004 NCKIPSDQ9NZQ3 722 aa14.02□□□□□ -0.17
NUP98-204ENST00000397004 TRHDEQ9UKU6 1024 aa14.02□□□□□ -0.17
NUP98-204ENST00000397004 STAP1Q9ULZ2 295 aa14.02□□□□□ -0.17
NUP98-204ENST00000397004 GMEB1Q9Y692 573 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms