RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 SULT1C4O75897 302 aa24.19■■□□□ 1.46
CSNK1E-203ENST00000396832 NR1D2Q14995 579 aa24.19■■□□□ 1.46
CSNK1E-203ENST00000396832 SLC25A52Q3SY17 297 aa24.19■■□□□ 1.46
CSNK1E-203ENST00000396832 C6orf10Q5SRN2 563 aa24.19■■□□□ 1.46
CSNK1E-203ENST00000396832 OTOP3Q7RTS5 596 aa24.19■■□□□ 1.46
CSNK1E-203ENST00000396832 ITPKCQ96DU7 683 aa24.19■■□□□ 1.46
CSNK1E-203ENST00000396832 CD300AQ9UGN4 299 aa24.19■■□□□ 1.46
CSNK1E-203ENST00000396832 CORINQ9Y5Q5 1042 aa24.19■■□□□ 1.46
CSNK1E-203ENST00000396832 AP2A1O95782 977 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 GJA8P48165 433 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 MERTKQ12866 999 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 REP15Q6BDI9 236 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 TMEM135Q86UB9 458 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 KDM1BQ8NB78 822 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 SPATA22Q8NHS9 363 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 RDH11Q8TC12 318 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 AFG1LQ8WV93 481 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 NXNL1Q96CM4 212 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 GNPTGQ9UJJ9 305 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 CLIC3O95833 236 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 TTKP33981 857 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 PPP1R3AQ16821 1122 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 DHFR2Q86XF0 187 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 CAMK1DQ8IU85 385 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 ZDHHC17Q8IUH5 632 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 CEP97Q8IW35 865 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 SLC15A4Q8N697 577 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 MFSD2AQ8NA29 543 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 STON2Q8WXE9 905 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 TSNARE1Q96NA8 513 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 HEPHQ9BQS7 1158 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 SNX25Q9H3E2 840 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 SETD4Q9NVD3 440 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 CCDC167Q9P0B6 97 aa24.18■■□□□ 1.46
CSNK1E-203ENST00000396832 TRIM64A6NGJ6 449 aa24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 SDHDO14521 159 aa24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 NRP1O14786 923 aa24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 DLX3O60479 287 aa24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 ZNF182P17025 639 aaPredicted RBP24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 TSPAN8P19075 237 aa24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 GRIA3P42263 894 aa24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 EIF2B2P49770 351 aaKnown RBP24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 TRAF2Q12933 501 aa24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 ERMP1Q7Z2K6 904 aa24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 ELP3Q9H9T3 547 aa24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 CDHR5Q9HBB8 845 aa24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 TMED5Q9Y3A6 229 aa24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 FAM32AQ9Y421 112 aaKnown RBP24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 TIMM44O43615 452 aa24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 DDHD2O94830 711 aa24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 ESRRBO95718 433 aa24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 SLC35E2BP0CK96 405 aa24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 CD300CQ08708 224 aa24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 PPIL2Q13356 520 aa24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 KCTD2Q14681 263 aa24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 RGS21Q2M5E4 152 aa24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 SMYD5Q6GMV2 418 aa24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 STRADAQ7RTN6 431 aa24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 CENPLQ8N0S6 344 aaPredicted RBP24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 HMGCLL1Q8TB92 370 aa24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 ATXN3LQ9H3M9 355 aa24.17■■□□□ 1.46
CSNK1E-203ENST00000396832 JCHAINP01591 159 aa24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 SOX11P35716 441 aa24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 PRKAA2P54646 552 aa24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 SNX16P57768 344 aa24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 TPI1P60174 286 aa24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 KCNC4Q03721 635 aa24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 POU5F1BQ06416 359 aa24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 CYP2A13Q16696 494 aa24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 AGKQ53H12 422 aa24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 NT5DC4Q86YG4 428 aa24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 C1QTNF1Q9BXJ1 281 aa24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 MUC3BQ9H195 1237 aa24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 CCDC68Q9H2F9 335 aa24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 GID8Q9NWU2 228 aa24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 SARDHQ9UL12 918 aa24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 MT-CYBP00156 380 aaPredicted RBP24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 MAPK10P53779 464 aa24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 GJA9P57773 515 aa24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 ITGADQ13349 1161 aa24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 C9orf57Q5W0N0 161 aa24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 KCTD8Q6ZWB6 473 aa24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 MOB2Q70IA6 237 aa24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 TERB1Q8NA31 727 aa24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 CYGBQ8WWM9 190 aa24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 MAELQ96JY0 434 aaKnown RBP24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 UPF3AQ9H1J1 476 aaKnown RBP24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 TNFRSF12AQ9NP84 129 aa24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 ANKRD12Q6UB98 2062 aa24.16■■□□□ 1.46
CSNK1E-203ENST00000396832 FAM149AA5PLN7 773 aa24.15■■□□□ 1.46
CSNK1E-203ENST00000396832 USP2O75604 605 aaPredicted RBP24.15■■□□□ 1.46
CSNK1E-203ENST00000396832 RECQL4O94761 1208 aa24.15■■□□□ 1.46
CSNK1E-203ENST00000396832 FAM187BQ17R55 369 aa24.15■■□□□ 1.46
CSNK1E-203ENST00000396832 ANO4Q32M45 955 aa24.15■■□□□ 1.46
CSNK1E-203ENST00000396832 DALRD3Q5D0E6 543 aaKnown RBP24.15■■□□□ 1.46
CSNK1E-203ENST00000396832 PELI3Q8N2H9 469 aa24.15■■□□□ 1.46
CSNK1E-203ENST00000396832 OR9I1Q8NGQ6 314 aa24.15■■□□□ 1.46
CSNK1E-203ENST00000396832 ACDQ96AP0 544 aa24.15■■□□□ 1.46
CSNK1E-203ENST00000396832 AURKCQ9UQB9 309 aa24.15■■□□□ 1.46
CSNK1E-203ENST00000396832 TRPC5OSA6NMA1 111 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms