RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 NBASA2RRP1 2371 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 ENO4A6NNW6 628 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 ZNF891A8MT65 544 aaPredicted RBP8.53□□□□□ -1.04
SCFD1-202ENST00000396629 ZNF202O95125 648 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 TNFP01375 233 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 UGT2B4P06133 528 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 CCL4P13236 92 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 TFE3P19532 575 aaPredicted RBP8.53□□□□□ -1.04
SCFD1-202ENST00000396629 TCEA2Q15560 299 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 WSCD2Q2TBF2 565 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 MYLK3Q32MK0 819 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 TMEM52BQ4KMG9 183 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 C14orf28Q4W4Y0 310 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 TTC7BQ86TV6 843 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 RYBPQ8N488 228 aaPredicted RBP8.53□□□□□ -1.04
SCFD1-202ENST00000396629 OR2AP1Q8NGE2 309 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 OR6K2Q8NGY2 324 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 ATL2Q8NHH9 583 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 ARHGEF2Q92974 986 aaKnown RBP8.53□□□□□ -1.04
SCFD1-202ENST00000396629 CEP63Q96MT8 703 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 APOOQ9BUR5 198 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 GOLPH3LQ9H4A5 285 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 TMEM51Q9NW97 253 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 RMND1Q9NWS8 449 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 LRIT1Q9P2V4 623 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 PCDHGC3Q9UN70 934 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 DGKBQ9Y6T7 804 aa8.53□□□□□ -1.04
SCFD1-202ENST00000396629 KRIT1O00522 736 aa8.52□□□□□ -1.05
SCFD1-202ENST00000396629 HGSO14964 777 aaPredicted RBP8.52□□□□□ -1.05
SCFD1-202ENST00000396629 CAPN5O15484 640 aaPredicted RBP8.52□□□□□ -1.05
SCFD1-202ENST00000396629 B4GAT1O43505 415 aa8.52□□□□□ -1.05
SCFD1-202ENST00000396629 NUDT21O43809 227 aaKnown RBP8.52□□□□□ -1.05
SCFD1-202ENST00000396629 F9P00740 461 aa8.52□□□□□ -1.05
SCFD1-202ENST00000396629 ERBB2P04626 1255 aa8.52□□□□□ -1.05
SCFD1-202ENST00000396629 PYGBP11216 843 aa8.52□□□□□ -1.05
SCFD1-202ENST00000396629 FGF3P11487 239 aaPredicted RBP8.52□□□□□ -1.05
SCFD1-202ENST00000396629 TIMP2P16035 220 aa8.52□□□□□ -1.05
SCFD1-202ENST00000396629 ITIH2P19823 946 aa8.52□□□□□ -1.05
SCFD1-202ENST00000396629 HTR1BP28222 390 aa8.52□□□□□ -1.05
SCFD1-202ENST00000396629 UGT1A3P35503 534 aa8.52□□□□□ -1.05
SCFD1-202ENST00000396629 SNRPD1P62314 119 aaKnown RBP8.52□□□□□ -1.05
SCFD1-202ENST00000396629 PKP1Q13835 747 aa8.52□□□□□ -1.05
SCFD1-202ENST00000396629 ARHGEF7Q14155 803 aa8.52□□□□□ -1.05
SCFD1-202ENST00000396629 LRRC14Q15048 493 aa8.52□□□□□ -1.05
SCFD1-202ENST00000396629 AGERQ15109 404 aa8.52□□□□□ -1.05
SCFD1-202ENST00000396629 CLPPQ16740 277 aaPredicted RBP8.52□□□□□ -1.05
SCFD1-202ENST00000396629 GDPD4Q6W3E5 623 aa8.52□□□□□ -1.05
SCFD1-202ENST00000396629 RD3Q7Z3Z2 195 aa8.52□□□□□ -1.05
SCFD1-202ENST00000396629 PIM3Q86V86 326 aa8.52□□□□□ -1.05
SCFD1-202ENST00000396629 SFTPA2Q8IWL1 248 aa8.52□□□□□ -1.05
SCFD1-202ENST00000396629 SLC45A3Q96JT2 553 aa8.52□□□□□ -1.05
SCFD1-202ENST00000396629 SPATA32Q96LK8 384 aa8.52□□□□□ -1.05
SCFD1-202ENST00000396629 WDR92Q96MX6 357 aa8.52□□□□□ -1.05
SCFD1-202ENST00000396629 HAPLN3Q96S86 360 aa8.52□□□□□ -1.05
SCFD1-202ENST00000396629 ZYG11BQ9C0D3 744 aa8.52□□□□□ -1.05
SCFD1-202ENST00000396629 INTS2Q9H0H0 1204 aaKnown RBP8.52□□□□□ -1.05
SCFD1-202ENST00000396629 UBE2TQ9NPD8 197 aaPredicted RBP8.52□□□□□ -1.05
SCFD1-202ENST00000396629 ZNF71Q9NQZ8 489 aaPredicted RBP8.52□□□□□ -1.05
SCFD1-202ENST00000396629 TMPRSS4Q9NRS4 437 aa8.52□□□□□ -1.05
SCFD1-202ENST00000396629 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.52□□□□□ -1.05
SCFD1-202ENST00000396629 DKK3Q9UBP4 350 aa8.52□□□□□ -1.05
SCFD1-202ENST00000396629 KLQ9UEF7 1012 aa8.52□□□□□ -1.05
SCFD1-202ENST00000396629 PLEKHB1Q9UF11 243 aaPredicted RBP8.52□□□□□ -1.05
SCFD1-202ENST00000396629 SPTAN1Q13813 2472 aaKnown RBP8.51□□□□□ -1.05
SCFD1-202ENST00000396629 CPNE6O95741 557 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 ACVRL1P37023 503 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 SULT1E1P49888 294 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 GEMIN4P57678 1058 aaKnown RBP8.51□□□□□ -1.05
SCFD1-202ENST00000396629 DEUP1Q05D60 604 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 PNOCQ13519 176 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 INPP5AQ14642 412 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 NR1D2Q14995 579 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 MAP9Q49MG5 647 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 CCDC40Q4G0X9 1142 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 LRRC73Q5JTD7 316 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 KCTD16Q68DU8 428 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 ZNF438Q7Z4V0 828 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 TAF8Q7Z7C8 310 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 CACNA2D3Q8IZS8 1091 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 IL22RA1Q8N6P7 574 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 FAM46DQ8NEK8 389 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 PMEPA1Q969W9 287 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 WRAP53Q9BUR4 548 aaKnown RBP8.51□□□□□ -1.05
SCFD1-202ENST00000396629 GTPBP4Q9BZE4 634 aaKnown RBP8.51□□□□□ -1.05
SCFD1-202ENST00000396629 PPARGC1AQ9UBK2 798 aaKnown RBP8.51□□□□□ -1.05
SCFD1-202ENST00000396629 COQ6Q9Y2Z9 468 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 UNC79Q9P2D8 2635 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 IGHV5-10-1A0A0J9YXX1 117 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 BECN2A8MW95 431 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 SRGAP2O75044 1071 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 ETFBP38117 255 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 SUOXP51687 545 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 SNX16P57768 344 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 POLD3Q15054 466 aaPredicted RBP8.51□□□□□ -1.05
SCFD1-202ENST00000396629 SPECC1LQ69YQ0 1117 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 ENOSF1Q7L5Y1 443 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 BNIPLQ7Z465 357 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 ATCAYQ86WG3 371 aa8.51□□□□□ -1.05
SCFD1-202ENST00000396629 C17orf82Q86X59 251 aaPredicted RBP8.51□□□□□ -1.05
SCFD1-202ENST00000396629 IRF2BP1Q8IU81 584 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms