RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 IFNGP01579 166 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 CATP04040 527 aaKnown RBP14.06□□□□□ -0.16
COL4A3-202ENST00000396578 ITGAVP06756 1048 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 APTXQ7Z2E3 356 aaKnown RBP14.06□□□□□ -0.16
COL4A3-202ENST00000396578 SNX7Q9UNH6 387 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 ABHD2P08910 425 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 CLCN5P51795 746 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 RAB10P61026 200 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 FNDC3BQ53EP0 1204 aaKnown RBP14.06□□□□□ -0.16
COL4A3-202ENST00000396578 GPRIN3Q6ZVF9 776 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 SLC9A6Q92581 669 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 DEFB129Q9H1M3 183 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 AFDNP55196 1824 aaKnown RBP14.06□□□□□ -0.16
COL4A3-202ENST00000396578 A0A1W2PQ72 361 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 MCIDASD6RGH6 385 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 NADKO95544 446 aaPredicted RBP14.06□□□□□ -0.16
COL4A3-202ENST00000396578 CSF1RP07333 972 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 ARFIP1P53367 373 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 IRF8Q02556 426 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 CRTC3Q6UUV7 619 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 DET1Q7L5Y6 550 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 SKA1Q96BD8 255 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 C12orf4Q9NQ89 552 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 TBC1D24Q9ULP9 559 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 RPL26L1Q9UNX3 145 aaKnown RBP14.06□□□□□ -0.16
COL4A3-202ENST00000396578 SLC12A4Q9UP95 1085 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 CLUHO75153 1309 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 A0A0G2JLW4 131 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 FAM240BA0A1B0GVZ2 78 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 IFNA6P05013 189 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 EIF4BP23588 611 aaKnown RBP14.06□□□□□ -0.16
COL4A3-202ENST00000396578 PDHA2P29803 388 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 IFNLR1Q8IU57 520 aaPredicted RBP14.06□□□□□ -0.16
COL4A3-202ENST00000396578 HIST2H2ABQ8IUE6 130 aaPredicted RBP14.06□□□□□ -0.16
COL4A3-202ENST00000396578 ELMO1Q92556 727 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 ZNF354BQ96LW1 612 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 PHF12Q96QT6 1004 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 MFHAS1Q9Y4C4 1052 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 CHD1O14646 1710 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 WFS1O76024 890 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 THRBP10828 461 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 TXNDC11Q6PKC3 985 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 NEK7Q8TDX7 302 aa14.06□□□□□ -0.16
COL4A3-202ENST00000396578 ABLIM1O14639 778 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 ZNF432O94892 652 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 POLR2EP19388 210 aaKnown RBP14.05□□□□□ -0.16
COL4A3-202ENST00000396578 MBTD1Q05BQ5 628 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 AAGABQ6PD74 315 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 TRNAU1APQ9NX07 287 aaKnown RBP14.05□□□□□ -0.16
COL4A3-202ENST00000396578 RAP2CQ9Y3L5 183 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 TELO2Q9Y4R8 837 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 PLK4O00444 970 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 SUV39H1O43463 412 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 CHST10O43529 356 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 MNDAP41218 407 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 RAB27AP51159 221 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 GTF2A2P52657 109 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 NT5DC1Q5TFE4 455 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 TXNRD3Q86VQ6 643 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 GMCL1P1Q8NEA9 526 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 NKX2-3Q8TAU0 364 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 PPP1R16AQ96I34 528 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 PANX1Q96RD7 426 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 RHBGQ9H310 441 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 NECTIN3Q9NQS3 549 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 PEX11AO75192 247 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 USP12O75317 370 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 ARF4P18085 180 aaPredicted RBP14.05□□□□□ -0.16
COL4A3-202ENST00000396578 RAB43Q86YS6 212 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 KLHL23Q8NBE8 558 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 RERGQ96A58 199 aaPredicted RBP14.05□□□□□ -0.16
COL4A3-202ENST00000396578 FDXACB1Q9BRP7 624 aaPredicted RBP14.05□□□□□ -0.16
COL4A3-202ENST00000396578 APOC1P02654 83 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 RPS12P25398 132 aaKnown RBP14.05□□□□□ -0.16
COL4A3-202ENST00000396578 CD86P42081 329 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 AP3S2P59780 193 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 LSM12Q3MHD2 195 aaKnown RBP14.05□□□□□ -0.16
COL4A3-202ENST00000396578 OR4A15Q8NGL6 344 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 PSMD13Q9UNM6 376 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 A8MX80 341 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 DCDC2CA8MYV0 355 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 GTPBP1O00178 669 aaKnown RBP14.05□□□□□ -0.16
COL4A3-202ENST00000396578 IFNA16P05015 189 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 RGS1Q08116 209 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 RAPSNQ13702 412 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 C12orf56Q8IXR9 622 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 LRRN4CLQ8ND94 238 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 OR52K1Q8NGK4 314 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 H3BNX3 289 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 RFXANKO14593 260 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 FFAR3O14843 346 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 GPR42O15529 346 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 OTCP00480 354 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 RPL38P63173 70 aaKnown RBP14.05□□□□□ -0.16
COL4A3-202ENST00000396578 BSNDQ8WZ55 320 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 OR52E6Q96RD3 313 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 OSMRQ99650 979 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 SQORQ9Y6N5 450 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 ZNF780BQ9Y6R6 833 aa14.05□□□□□ -0.16
COL4A3-202ENST00000396578 URADA6NGE7 173 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms