RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 MGAT5Q09328 741 aa12.82□□□□□ -0.36
TRIM39-204ENST00000396548 PDGFRLQ15198 375 aa12.82□□□□□ -0.36
TRIM39-204ENST00000396548 PTPRNQ16849 979 aa12.82□□□□□ -0.36
TRIM39-204ENST00000396548 NAT16Q8N8M0 369 aa12.82□□□□□ -0.36
TRIM39-204ENST00000396548 PPHLN1Q8NEY8 458 aaKnown RBP12.82□□□□□ -0.36
TRIM39-204ENST00000396548 ST13P5Q8NFI4 369 aaPredicted RBP12.82□□□□□ -0.36
TRIM39-204ENST00000396548 FRS2Q8WU20 508 aa12.82□□□□□ -0.36
TRIM39-204ENST00000396548 RPL10LQ96L21 214 aaKnown RBP12.82□□□□□ -0.36
TRIM39-204ENST00000396548 EBF3Q9H4W6 596 aa12.82□□□□□ -0.36
TRIM39-204ENST00000396548 ECT2Q9H8V3 914 aa12.82□□□□□ -0.36
TRIM39-204ENST00000396548 PCDHGC4Q9Y5F7 938 aa12.82□□□□□ -0.36
TRIM39-204ENST00000396548 PSAT1Q9Y617 370 aa12.82□□□□□ -0.36
TRIM39-204ENST00000396548 ERVK-10P10266 1014 aa12.82□□□□□ -0.36
TRIM39-204ENST00000396548 AP1S1P61966 158 aa12.82□□□□□ -0.36
TRIM39-204ENST00000396548 PPP2R2AP63151 447 aa12.82□□□□□ -0.36
TRIM39-204ENST00000396548 SULT2A1Q06520 285 aa12.82□□□□□ -0.36
TRIM39-204ENST00000396548 GALNT3Q14435 633 aa12.82□□□□□ -0.36
TRIM39-204ENST00000396548 TMED2Q15363 201 aa12.82□□□□□ -0.36
TRIM39-204ENST00000396548 ESRP1Q6NXG1 681 aaKnown RBP12.82□□□□□ -0.36
TRIM39-204ENST00000396548 PLPP6Q8IY26 295 aa12.82□□□□□ -0.36
TRIM39-204ENST00000396548 FGF14Q92915 247 aa12.82□□□□□ -0.36
TRIM39-204ENST00000396548 ZFP14Q9HCL3 533 aa12.82□□□□□ -0.36
TRIM39-204ENST00000396548 RIMKLBQ9ULI2 386 aa12.82□□□□□ -0.36
TRIM39-204ENST00000396548 CHKBQ9Y259 395 aa12.82□□□□□ -0.36
TRIM39-204ENST00000396548 PRRC2BQ5JSZ5 2229 aaKnown RBP12.82□□□□□ -0.36
TRIM39-204ENST00000396548 A0A1W2PPM1 405 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 NFATC1O95644 943 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 GSRP00390 522 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 NR1H3Q13133 447 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 TSTD2Q5T7W7 516 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 MBLAC2Q68D91 279 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 CES5AQ6NT32 575 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 PARM1Q6UWI2 310 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 PPM1NQ8N819 430 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 IFT43Q96FT9 208 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 CLDND1Q9NY35 253 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 ERVW-1Q9UQF0 538 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 COLQQ9Y215 455 aaPredicted RBP12.81□□□□□ -0.36
TRIM39-204ENST00000396548 SPO11Q9Y5K1 396 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 HEATR9A2RTY3 570 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 SOX1O00570 391 aaPredicted RBP12.81□□□□□ -0.36
TRIM39-204ENST00000396548 ATP5DP30049 168 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 SLC6A11P48066 632 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 C22orf39Q6P5X5 142 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 RIPOR3Q96MK2 946 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 EPS15L1Q9UBC2 864 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 SHOX2O60902 331 aaPredicted RBP12.81□□□□□ -0.36
TRIM39-204ENST00000396548 TULP3O75386 442 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 ECI2O75521 394 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 MTHFRP42898 656 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 DGKGP49619 791 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 MPP2Q14168 576 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 KIAA0930Q6ICG6 404 aaPredicted RBP12.81□□□□□ -0.36
TRIM39-204ENST00000396548 MICALCLQ6ZW33 695 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 MDGA1Q8NFP4 955 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 OR2AP1Q8NGE2 309 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 BRSK1Q8TDC3 778 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 PIH1D2Q8WWB5 315 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 MYLIPQ8WY64 445 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 PEX13Q92968 403 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 AGAP2Q99490 1192 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 SLCO3A1Q9UIG8 710 aa12.81□□□□□ -0.36
TRIM39-204ENST00000396548 WASH3PC4AMC7 463 aa12.8□□□□□ -0.36
TRIM39-204ENST00000396548 ANHXE9PGG2 379 aa12.8□□□□□ -0.36
TRIM39-204ENST00000396548 PRKCGP05129 697 aa12.8□□□□□ -0.36
TRIM39-204ENST00000396548 CSRP3P50461 194 aa12.8□□□□□ -0.36
TRIM39-204ENST00000396548 QPCTQ16769 361 aa12.8□□□□□ -0.36
TRIM39-204ENST00000396548 PACS1Q6VY07 963 aa12.8□□□□□ -0.36
TRIM39-204ENST00000396548 KCNMB4Q86W47 210 aa12.8□□□□□ -0.36
TRIM39-204ENST00000396548 ECHDC3Q96DC8 303 aa12.8□□□□□ -0.36
TRIM39-204ENST00000396548 MRRFQ96E11 262 aaKnown RBP12.8□□□□□ -0.36
TRIM39-204ENST00000396548 SERAC1Q96JX3 654 aa12.8□□□□□ -0.36
TRIM39-204ENST00000396548 SMIM14Q96QK8 99 aa12.8□□□□□ -0.36
TRIM39-204ENST00000396548 TNKS2Q9H2K2 1166 aa12.8□□□□□ -0.36
TRIM39-204ENST00000396548 SSU72Q9NP77 194 aaKnown RBP12.8□□□□□ -0.36
TRIM39-204ENST00000396548 THG1LQ9NWX6 298 aaKnown RBP12.8□□□□□ -0.36
TRIM39-204ENST00000396548 GGT7Q9UJ14 662 aa12.8□□□□□ -0.36
TRIM39-204ENST00000396548 ANKRD66B4E2M5 251 aa12.8□□□□□ -0.36
TRIM39-204ENST00000396548 TYROBPO43914 113 aa12.8□□□□□ -0.36
TRIM39-204ENST00000396548 PGLSO95336 258 aa12.8□□□□□ -0.36
TRIM39-204ENST00000396548 ZNF140P52738 457 aaPredicted RBP12.8□□□□□ -0.36
TRIM39-204ENST00000396548 CDKN3Q16667 212 aa12.8□□□□□ -0.36
TRIM39-204ENST00000396548 PDPK2PQ6A1A2 396 aa12.8□□□□□ -0.36
TRIM39-204ENST00000396548 TIFABQ6ZNK6 161 aa12.8□□□□□ -0.36
TRIM39-204ENST00000396548 ZSWIM9Q86XI8 627 aa12.8□□□□□ -0.36
TRIM39-204ENST00000396548 PCDH20Q8N6Y1 951 aaKnown RBP12.8□□□□□ -0.36
TRIM39-204ENST00000396548 RPP25Q9BUL9 199 aaKnown RBP12.8□□□□□ -0.36
TRIM39-204ENST00000396548 CPEB1Q9BZB8 566 aaKnown RBP12.8□□□□□ -0.36
TRIM39-204ENST00000396548 TM6SF2Q9BZW4 377 aa12.8□□□□□ -0.36
TRIM39-204ENST00000396548 EVLQ9UI08 416 aaPredicted RBP12.8□□□□□ -0.36
TRIM39-204ENST00000396548 SLC25A13Q9UJS0 675 aa12.8□□□□□ -0.36
TRIM39-204ENST00000396548 KCTD3Q9Y597 815 aa12.8□□□□□ -0.36
TRIM39-204ENST00000396548 TICRRQ7Z2Z1 1910 aa12.8□□□□□ -0.36
TRIM39-204ENST00000396548 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.79□□□□□ -0.36
TRIM39-204ENST00000396548 PRRT4C9JH25 899 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 AURKAO14965 403 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 SOCS5O75159 536 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 RFPL1O75677 317 aa12.79□□□□□ -0.36
TRIM39-204ENST00000396548 SRPRAP08240 638 aaKnown RBP12.79□□□□□ -0.36
TRIM39-204ENST00000396548 HPDP32754 393 aaPredicted RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms