RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 LPCAT1Q8NF37 534 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 PTCD2Q8WV60 388 aaKnown RBP20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 CHFRQ96EP1 664 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 MYO19Q96H55 970 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 KIFC1Q9BW19 673 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 CENPHQ9H3R5 247 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 ATP13A3Q9H7F0 1226 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 MED4Q9NPJ6 270 aa20.59■□□□□ 0.89
VCPKMT-202ENST00000395860 TTC34A8MYJ7 566 aa20.58■□□□□ 0.89
VCPKMT-202ENST00000395860 KAT7O95251 611 aa20.58■□□□□ 0.89
VCPKMT-202ENST00000395860 PIGNO95427 931 aa20.58■□□□□ 0.89
VCPKMT-202ENST00000395860 SYF2O95926 243 aaKnown RBP20.58■□□□□ 0.89
VCPKMT-202ENST00000395860 PRLP01236 227 aa20.58■□□□□ 0.89
VCPKMT-202ENST00000395860 PDHA1P08559 390 aa20.58■□□□□ 0.89
VCPKMT-202ENST00000395860 ALADP13716 330 aa20.58■□□□□ 0.89
VCPKMT-202ENST00000395860 ADRA1DP25100 572 aa20.58■□□□□ 0.89
VCPKMT-202ENST00000395860 GKP32189 559 aa20.58■□□□□ 0.89
VCPKMT-202ENST00000395860 SLCO1A2P46721 670 aa20.58■□□□□ 0.89
VCPKMT-202ENST00000395860 CCNHP51946 323 aaPredicted RBP20.58■□□□□ 0.89
VCPKMT-202ENST00000395860 PKN3Q6P5Z2 889 aa20.58■□□□□ 0.89
VCPKMT-202ENST00000395860 CES3Q6UWW8 571 aa20.58■□□□□ 0.89
VCPKMT-202ENST00000395860 NUDT18Q6ZVK8 323 aa20.58■□□□□ 0.89
VCPKMT-202ENST00000395860 TMEM135Q86UB9 458 aa20.58■□□□□ 0.89
VCPKMT-202ENST00000395860 CAMK1DQ8IU85 385 aa20.58■□□□□ 0.89
VCPKMT-202ENST00000395860 PAF1Q8N7H5 531 aa20.58■□□□□ 0.89
VCPKMT-202ENST00000395860 UCMAQ8WVF2 138 aa20.58■□□□□ 0.89
VCPKMT-202ENST00000395860 CYTH2Q99418 400 aa20.58■□□□□ 0.89
VCPKMT-202ENST00000395860 KCNK12Q9HB15 430 aa20.58■□□□□ 0.89
VCPKMT-202ENST00000395860 TCAF1Q9Y4C2 921 aa20.58■□□□□ 0.89
VCPKMT-202ENST00000395860 HEATR9A2RTY3 570 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 POC1B-GALNT4F8VUJ3 575 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 POP4O95707 220 aaKnown RBP20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 APODP05090 189 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 SERPINA4P29622 427 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 SOX9P48436 509 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 SMAD2Q15796 467 aaKnown RBP20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 ARMC12Q5T9G4 340 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 DPY19L3Q6ZPD9 716 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 PLPP6Q8IY26 295 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 FRS2Q8WU20 508 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 MFSD3Q96ES6 412 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 TUBGCP5Q96RT8 1024 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 RANBP9Q96S59 729 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 ZDHHC6Q9H6R6 413 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 MRM3Q9HC36 420 aaKnown RBP20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 PCDHB9Q9Y5E1 797 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 COL4A2P08572 1712 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 CCDC78A2IDD5 438 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 SOCS5O75159 536 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 TCEA3O75764 348 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 NMBRP28336 390 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 GRIA2P42262 883 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 EPHB1P54762 984 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 MSLNQ13421 630 aaPredicted RBP20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 GRM3Q14832 879 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 EFTUD2Q15029 972 aaKnown RBP eCLIP20.57■□□□□ 0.884e-6■■■□□ 14.8
VCPKMT-202ENST00000395860 KBTBD12Q3ZCT8 623 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 LEXMQ3ZCV2 418 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 ANKRD20A4Q4UJ75 823 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 FNDC3BQ53EP0 1204 aaKnown RBP20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 ARMC3Q5W041 872 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 TRMT10BQ6PF06 316 aaKnown RBP20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 SFTPA1Q8IWL2 248 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 OR2A12Q8NGT7 310 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 BLOC1S5Q8TDH9 187 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 FCRL3Q96P31 734 aaPredicted RBP20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 TMBIM4Q9HC24 238 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 PPANQ9NQ55 473 aaKnown RBP20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 FAM169AQ9Y6X4 670 aa20.57■□□□□ 0.88
VCPKMT-202ENST00000395860 ANKRD66B4E2M5 251 aa20.56■□□□□ 0.88
VCPKMT-202ENST00000395860 FZD6O60353 706 aa20.56■□□□□ 0.88
VCPKMT-202ENST00000395860 ALDH1A2O94788 518 aa20.56■□□□□ 0.88
VCPKMT-202ENST00000395860 PGLSO95336 258 aa20.56■□□□□ 0.88
VCPKMT-202ENST00000395860 PRKCHP24723 683 aa20.56■□□□□ 0.88
VCPKMT-202ENST00000395860 HABP4Q5JVS0 413 aaKnown RBP20.56■□□□□ 0.88
VCPKMT-202ENST00000395860 SLC44A3Q8N4M1 653 aa20.56■□□□□ 0.88
VCPKMT-202ENST00000395860 MRRFQ96E11 262 aaKnown RBP20.56■□□□□ 0.88
VCPKMT-202ENST00000395860 CPEB1Q9BZB8 566 aaKnown RBP20.56■□□□□ 0.88
VCPKMT-202ENST00000395860 PPCSQ9HAB8 311 aa20.56■□□□□ 0.88
VCPKMT-202ENST00000395860 FAM53CQ9NYF3 392 aa20.56■□□□□ 0.88
VCPKMT-202ENST00000395860 MOCS1Q9NZB8 636 aa20.56■□□□□ 0.88
VCPKMT-202ENST00000395860 PRKAG3Q9UGI9 489 aa20.56■□□□□ 0.88
VCPKMT-202ENST00000395860 H3BQF6 201 aa20.55■□□□□ 0.88
VCPKMT-202ENST00000395860 TRAFD1O14545 582 aaPredicted RBP20.55■□□□□ 0.88
VCPKMT-202ENST00000395860 HTRA2O43464 458 aaPredicted RBP20.55■□□□□ 0.88
VCPKMT-202ENST00000395860 PIAS1O75925 651 aa20.55■□□□□ 0.88
VCPKMT-202ENST00000395860 PRKCGP05129 697 aa20.55■□□□□ 0.88
VCPKMT-202ENST00000395860 CYS1Q717R9 158 aa20.55■□□□□ 0.88
VCPKMT-202ENST00000395860 KDM1BQ8NB78 822 aa20.55■□□□□ 0.88
VCPKMT-202ENST00000395860 CHST14Q8NCH0 376 aa20.55■□□□□ 0.88
VCPKMT-202ENST00000395860 PKNOX2Q96KN3 472 aa20.55■□□□□ 0.88
VCPKMT-202ENST00000395860 ZNF778Q96MU6 729 aa20.55■□□□□ 0.88
VCPKMT-202ENST00000395860 BCCIPQ9P287 314 aaKnown RBP eCLIP20.55■□□□□ 0.88
VCPKMT-202ENST00000395860 FETUBQ9UGM5 382 aa20.55■□□□□ 0.88
VCPKMT-202ENST00000395860 EYSQ5T1H1 3165 aa20.55■□□□□ 0.88
VCPKMT-202ENST00000395860 ZCWPW2A0A1B0GU75 182 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 WASH3PC4AMC7 463 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 GOLGA8KD6RF30 607 aa20.54■□□□□ 0.88
VCPKMT-202ENST00000395860 PIRTP0C851 137 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms