RNA–Protein interactions for RNA: ENST00000395548.6

AP3S1-202, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP3S1, Length 1,180 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-202ENST00000395548 CLDN6P56747 220 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 ZNF267Q14586 743 aaPredicted RBP5.75□□□□□ -1.49
AP3S1-202ENST00000395548 ACAP2Q15057 778 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 PDGFRLQ15198 375 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 ZSCAN23Q3MJ62 389 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 TUBB8Q3ZCM7 444 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 LY6G5CQ5SRR4 150 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 TPGS2Q68CL5 300 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 TIPARPQ7Z3E1 657 aaKnown RBP5.75□□□□□ -1.49
AP3S1-202ENST00000395548 ZNF410Q86VK4 478 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 TTC30BQ8N4P2 665 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 LRRC71Q8N4P6 559 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 FAM156AQ8NDB6 213 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 NSUN7Q8NE18 718 aaKnown RBP5.75□□□□□ -1.49
AP3S1-202ENST00000395548 OR52N2Q8NGI0 321 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 DNASE2BQ8WZ79 361 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 LRRC27Q9C0I9 530 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 WDR12Q9GZL7 423 aaKnown RBP5.75□□□□□ -1.49
AP3S1-202ENST00000395548 MYLK2Q9H1R3 596 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 BOLA2Q9H3K6 86 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 POLR1BQ9H9Y6 1135 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 HPS4Q9NQG7 708 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 ZNF302Q9NR11 478 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 RASSF1Q9NS23 344 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 AGPAT5Q9NUQ2 364 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 VPS4AQ9UN37 437 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 PCDHGA9Q9Y5G4 932 aaKnown RBP5.75□□□□□ -1.49
AP3S1-202ENST00000395548 PCDHGA8Q9Y5G5 932 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 PCDHGA7Q9Y5G6 932 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 PCDHGA6Q9Y5G7 932 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 PCDHGA3Q9Y5H0 932 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 DMRT1Q9Y5R6 373 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 EVPLQ92817 2033 aa5.75□□□□□ -1.49
AP3S1-202ENST00000395548 FBN1P35555 2871 aaKnown RBP5.74□□□□□ -1.49
AP3S1-202ENST00000395548 HELZP42694 1942 aaKnown RBP5.74□□□□□ -1.49
AP3S1-202ENST00000395548 HIVEP3Q5T1R4 2406 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 IGHV1OR15-9A0A0B4J2B8 117 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 A0A1W2PRQ8 180 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 TCRBV21S2A2A0A5A6 115 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 MEI4A8MW99 385 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 PRAMEF4O60810 478 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 ZFYP08048 801 aaPredicted RBP5.74□□□□□ -1.49
AP3S1-202ENST00000395548 ATP5JP18859 108 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 U2AF2P26368 475 aaKnown RBP eCLIP5.74□□□□□ -1.491e-6■■■□□ 14.8
AP3S1-202ENST00000395548 RBMS1P29558 406 aaKnown RBP5.74□□□□□ -1.49
AP3S1-202ENST00000395548 RXRGP48443 463 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 SCAND1P57086 179 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 E2F1Q01094 437 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 APBA1Q02410 837 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 TWF1Q12792 350 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 GRIK3Q13003 919 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 PLD1Q13393 1074 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 MIS18BP1Q6P0N0 1132 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 TLDC1Q6P9B6 456 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 KDM7AQ6ZMT4 941 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 RHOUQ7L0Q8 258 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 LYSMD2Q8IV50 215 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 MIER2Q8N344 545 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 ZBTB34Q8NCN2 500 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 PROKR1Q8TCW9 393 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 IGSF8Q969P0 613 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 CNDP2Q96KP4 475 aaKnown RBP5.74□□□□□ -1.49
AP3S1-202ENST00000395548 FAM167AQ96KS9 214 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 DCLRE1CQ96SD1 692 aaKnown RBP5.74□□□□□ -1.49
AP3S1-202ENST00000395548 ACO2Q99798 780 aaKnown RBP5.74□□□□□ -1.49
AP3S1-202ENST00000395548 NDC1Q9BTX1 674 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 LY9Q9HBG7 655 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 AGO4Q9HCK5 861 aaKnown RBP5.74□□□□□ -1.49
AP3S1-202ENST00000395548 ECHDC1Q9NTX5 307 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 RRN3Q9NYV6 651 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 TUBD1Q9UJT1 453 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 ITGB1BP2Q9UKP3 347 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 PCDHGB6Q9Y5F9 930 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 UBIAD1Q9Y5Z9 338 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 PLXND1Q9Y4D7 1925 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 UBE4BO95155 1302 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 ITIH6Q6UXX5 1313 aa5.74□□□□□ -1.49
AP3S1-202ENST00000395548 A0A1B0GVC2 190 aa5.73□□□□□ -1.49
AP3S1-202ENST00000395548 A6NCN8 305 aa5.73□□□□□ -1.49
AP3S1-202ENST00000395548 K7ENM7 598 aa5.73□□□□□ -1.49
AP3S1-202ENST00000395548 LAD1O00515 517 aa5.73□□□□□ -1.49
AP3S1-202ENST00000395548 PAPSS1O43252 624 aaPredicted RBP5.73□□□□□ -1.49
AP3S1-202ENST00000395548 TRAPPC3O43617 180 aa5.73□□□□□ -1.49
AP3S1-202ENST00000395548 ABHD16AO95870 558 aa5.73□□□□□ -1.49
AP3S1-202ENST00000395548 GASTP01350 101 aa5.73□□□□□ -1.49
AP3S1-202ENST00000395548 PTMAP06454 111 aaKnown RBP5.73□□□□□ -1.49
AP3S1-202ENST00000395548 KIF5BP33176 963 aa5.73□□□□□ -1.49
AP3S1-202ENST00000395548 ACADVLP49748 655 aa5.73□□□□□ -1.49
AP3S1-202ENST00000395548 LGALS4P56470 323 aa5.73□□□□□ -1.49
AP3S1-202ENST00000395548 ROR1Q01973 937 aa5.73□□□□□ -1.49
AP3S1-202ENST00000395548 TRIM25Q14258 630 aaKnown RBP5.73□□□□□ -1.49
AP3S1-202ENST00000395548 UGT8Q16880 541 aa5.73□□□□□ -1.49
AP3S1-202ENST00000395548 TIGD2Q4W5G0 525 aa5.73□□□□□ -1.49
AP3S1-202ENST00000395548 PITRM1Q5JRX3 1037 aa5.73□□□□□ -1.49
AP3S1-202ENST00000395548 C1QTNF12Q5T7M4 302 aa5.73□□□□□ -1.49
AP3S1-202ENST00000395548 INTS11Q5TA45 600 aaKnown RBP5.73□□□□□ -1.49
AP3S1-202ENST00000395548 TSHZ3Q63HK5 1081 aa5.73□□□□□ -1.49
AP3S1-202ENST00000395548 SLC8B1Q6J4K2 584 aa5.73□□□□□ -1.49
AP3S1-202ENST00000395548 ABHD15Q6UXT9 468 aa5.73□□□□□ -1.49
AP3S1-202ENST00000395548 C1orf122Q6ZSJ8 110 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms