RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 AREL1O15033 823 aa20.09■□□□□ 0.81
SNCA-203ENST00000394986 CFIP05156 583 aa20.09■□□□□ 0.81
SNCA-203ENST00000394986 CD27P26842 260 aa20.09■□□□□ 0.81
SNCA-203ENST00000394986 ATP5OP48047 213 aa20.09■□□□□ 0.81
SNCA-203ENST00000394986 WASHC5Q12768 1159 aa20.09■□□□□ 0.81
SNCA-203ENST00000394986 KLF1Q13351 362 aaPredicted RBP20.09■□□□□ 0.81
SNCA-203ENST00000394986 CSRP2Q16527 193 aa20.09■□□□□ 0.81
SNCA-203ENST00000394986 UGP2Q16851 508 aa20.09■□□□□ 0.81
SNCA-203ENST00000394986 TRIM61Q5EBN2 209 aa20.09■□□□□ 0.81
SNCA-203ENST00000394986 SEL1L2Q5TEA6 688 aa20.09■□□□□ 0.81
SNCA-203ENST00000394986 LAYNQ6UX15 382 aa20.09■□□□□ 0.81
SNCA-203ENST00000394986 TRIM69Q86WT6 500 aa20.09■□□□□ 0.81
SNCA-203ENST00000394986 PAF1Q8N7H5 531 aa20.09■□□□□ 0.81
SNCA-203ENST00000394986 AMACRQ9UHK6 382 aa20.09■□□□□ 0.81
SNCA-203ENST00000394986 ZNF292O60281 2723 aa20.08■□□□□ 0.81
SNCA-203ENST00000394986 A0A1W2PPC4 97 aa20.08■□□□□ 0.8
SNCA-203ENST00000394986 UPK3BL1B0FP48 263 aa20.08■□□□□ 0.8
SNCA-203ENST00000394986 UPK3BL2E5RIL1 263 aa20.08■□□□□ 0.8
SNCA-203ENST00000394986 ENC1O14682 589 aa20.08■□□□□ 0.8
SNCA-203ENST00000394986 WNT9AO14904 365 aa20.08■□□□□ 0.8
SNCA-203ENST00000394986 LATO43561 262 aa20.08■□□□□ 0.8
SNCA-203ENST00000394986 AP1G1O43747 822 aa20.08■□□□□ 0.8
SNCA-203ENST00000394986 LRP3O75074 770 aa20.08■□□□□ 0.8
SNCA-203ENST00000394986 ZNF806P0C7X5 589 aa20.08■□□□□ 0.8
SNCA-203ENST00000394986 PRLRP16471 622 aa20.08■□□□□ 0.8
SNCA-203ENST00000394986 XPAP23025 273 aaPredicted RBP20.08■□□□□ 0.8
SNCA-203ENST00000394986 EIF3EP60228 445 aaKnown RBP20.08■□□□□ 0.8
SNCA-203ENST00000394986 GON4LQ3T8J9 2241 aa20.08■□□□□ 0.8
SNCA-203ENST00000394986 SLC45A4Q5BKX6 768 aa20.08■□□□□ 0.8
SNCA-203ENST00000394986 BRAT1Q6PJG6 821 aa20.08■□□□□ 0.8
SNCA-203ENST00000394986 PRR23CQ6ZRP0 262 aa20.08■□□□□ 0.8
SNCA-203ENST00000394986 HORMAD1Q86X24 394 aa20.08■□□□□ 0.8
SNCA-203ENST00000394986 RAB7BQ96AH8 199 aa20.08■□□□□ 0.8
SNCA-203ENST00000394986 SLC6A18Q96N87 628 aa20.08■□□□□ 0.8
SNCA-203ENST00000394986 MYOCQ99972 504 aa20.08■□□□□ 0.8
SNCA-203ENST00000394986 TM9SF3Q9HD45 589 aa20.08■□□□□ 0.8
SNCA-203ENST00000394986 FZD3Q9NPG1 666 aa20.08■□□□□ 0.8
SNCA-203ENST00000394986 PCDH12Q9NPG4 1184 aa20.08■□□□□ 0.8
SNCA-203ENST00000394986 RXFP3Q9NSD7 469 aa20.08■□□□□ 0.8
SNCA-203ENST00000394986 RAI2Q9Y5P3 530 aa20.08■□□□□ 0.8
SNCA-203ENST00000394986 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.08■□□□□ 0.8
SNCA-203ENST00000394986 BCAT2O15382 392 aaPredicted RBP20.07■□□□□ 0.8
SNCA-203ENST00000394986 HTRA2O43464 458 aaPredicted RBP20.07■□□□□ 0.8
SNCA-203ENST00000394986 SOCS5O75159 536 aa20.07■□□□□ 0.8
SNCA-203ENST00000394986 MMP2P08253 660 aa20.07■□□□□ 0.8
SNCA-203ENST00000394986 RBL1P28749 1068 aa20.07■□□□□ 0.8
SNCA-203ENST00000394986 HOXD11P31277 338 aaPredicted RBP20.07■□□□□ 0.8
SNCA-203ENST00000394986 HOXD12P35452 270 aa20.07■□□□□ 0.8
SNCA-203ENST00000394986 CD86P42081 329 aa20.07■□□□□ 0.8
SNCA-203ENST00000394986 ZNF284Q2VY69 593 aa20.07■□□□□ 0.8
SNCA-203ENST00000394986 TEX44Q53QW1 395 aa20.07■□□□□ 0.8
SNCA-203ENST00000394986 RALGPS1Q5JS13 557 aa20.07■□□□□ 0.8
SNCA-203ENST00000394986 ZNF569Q5MCW4 686 aa20.07■□□□□ 0.8
SNCA-203ENST00000394986 ADAT2Q7Z6V5 191 aaKnown RBP20.07■□□□□ 0.8
SNCA-203ENST00000394986 HCAR2Q8TDS4 363 aa20.07■□□□□ 0.8
SNCA-203ENST00000394986 HTR3CQ8WXA8 447 aa20.07■□□□□ 0.8
SNCA-203ENST00000394986 WRAP53Q9BUR4 548 aaKnown RBP20.07■□□□□ 0.8
SNCA-203ENST00000394986 CA5BQ9Y2D0 317 aa20.07■□□□□ 0.8
SNCA-203ENST00000394986 PCDHB9Q9Y5E1 797 aa20.07■□□□□ 0.8
SNCA-203ENST00000394986 FAM186AA6NE01 2351 aa20.07■□□□□ 0.8
SNCA-203ENST00000394986 CEP192Q8TEP8 1941 aa20.06■□□□□ 0.8
SNCA-203ENST00000394986 GOLGA6L9A6NEM1 432 aa20.06■□□□□ 0.8
SNCA-203ENST00000394986 HACD1B0YJ81 288 aa20.06■□□□□ 0.8
SNCA-203ENST00000394986 F5H423 210 aaPredicted RBP20.06■□□□□ 0.8
SNCA-203ENST00000394986 KHNYNO15037 678 aaKnown RBP20.06■□□□□ 0.8
SNCA-203ENST00000394986 SLC31A1O15431 190 aa20.06■□□□□ 0.8
SNCA-203ENST00000394986 CPP00450 1065 aa20.06■□□□□ 0.8
SNCA-203ENST00000394986 PDHA1P08559 390 aa20.06■□□□□ 0.8
SNCA-203ENST00000394986 RBP3P10745 1247 aa20.06■□□□□ 0.8
SNCA-203ENST00000394986 CXCR5P32302 372 aa20.06■□□□□ 0.8
SNCA-203ENST00000394986 DPP6P42658 865 aa20.06■□□□□ 0.8
SNCA-203ENST00000394986 IRX4P78413 519 aa20.06■□□□□ 0.8
SNCA-203ENST00000394986 XRCC4Q13426 336 aa20.06■□□□□ 0.8
SNCA-203ENST00000394986 FGL2Q14314 439 aa20.06■□□□□ 0.8
SNCA-203ENST00000394986 PTPRRQ15256 657 aa20.06■□□□□ 0.8
SNCA-203ENST00000394986 DUOXA1Q1HG43 343 aa20.06■□□□□ 0.8
SNCA-203ENST00000394986 TMEM259Q4ZIN3 620 aa20.06■□□□□ 0.8
SNCA-203ENST00000394986 NEK5Q6P3R8 708 aa20.06■□□□□ 0.8
SNCA-203ENST00000394986 PRPF39Q86UA1 669 aaKnown RBP20.06■□□□□ 0.8
SNCA-203ENST00000394986 SLC35F6Q8N357 371 aa20.06■□□□□ 0.8
SNCA-203ENST00000394986 SERAC1Q96JX3 654 aa20.06■□□□□ 0.8
SNCA-203ENST00000394986 RBM15Q96T37 977 aaKnown RBP eCLIP20.06■□□□□ 0.8
SNCA-203ENST00000394986 CARD9Q9H257 536 aa20.06■□□□□ 0.8
SNCA-203ENST00000394986 HAUS2Q9NVX0 235 aa20.06■□□□□ 0.8
SNCA-203ENST00000394986 SUSD2Q9UGT4 822 aa20.06■□□□□ 0.8
SNCA-203ENST00000394986 A0A1B0GTW7 788 aa20.05■□□□□ 0.8
SNCA-203ENST00000394986 IGLON5A6NGN9 336 aa20.05■□□□□ 0.8
SNCA-203ENST00000394986 RIOK3O14730 519 aaKnown RBP20.05■□□□□ 0.8
SNCA-203ENST00000394986 TSPAN6O43657 245 aa20.05■□□□□ 0.8
SNCA-203ENST00000394986 GDF9O60383 454 aa20.05■□□□□ 0.8
SNCA-203ENST00000394986 MMP20O60882 483 aa20.05■□□□□ 0.8
SNCA-203ENST00000394986 PGLSO95336 258 aa20.05■□□□□ 0.8
SNCA-203ENST00000394986 GNSP15586 552 aa20.05■□□□□ 0.8
SNCA-203ENST00000394986 CD68P34810 354 aaPredicted RBP20.05■□□□□ 0.8
SNCA-203ENST00000394986 FAM193AP78312 1265 aa20.05■□□□□ 0.8
SNCA-203ENST00000394986 SKOR1P84550 965 aa20.05■□□□□ 0.8
SNCA-203ENST00000394986 ARMC12Q5T9G4 340 aa20.05■□□□□ 0.8
SNCA-203ENST00000394986 KIAA1161Q6NSJ0 714 aa20.05■□□□□ 0.8
SNCA-203ENST00000394986 SLC23A3Q6PIS1 610 aa20.05■□□□□ 0.8
SNCA-203ENST00000394986 SLC13A5Q86YT5 568 aaPredicted RBP20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms