RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 CCNYL1Q8N7R7 359 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 FAM47BQ8NA70 645 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 NRG4Q8WWG1 115 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 GAB3Q8WWW8 586 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 FAM136AQ96C01 138 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 ITPKCQ96DU7 683 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 APOPT1Q96IL0 206 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 CELF6Q96J87 481 aaKnown RBP5.74□□□□□ -1.49
RFFL-202ENST00000394597 SRPK1Q96SB4 655 aaKnown RBP5.74□□□□□ -1.49
RFFL-202ENST00000394597 EMILIN2Q9BXX0 1053 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 UNC93B1Q9H1C4 597 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 ADAM7Q9H2U9 754 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 CXorf21Q9HAI6 301 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 RPRD1BQ9NQG5 326 aaKnown RBP5.74□□□□□ -1.49
RFFL-202ENST00000394597 ABCB10Q9NRK6 738 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 TRHDEQ9UKU6 1024 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 CDY1Q9Y6F8 540 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 DOCK1Q14185 1865 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 MYH9P35579 1960 aaKnown RBP5.74□□□□□ -1.49
RFFL-202ENST00000394597 PRPF4O43172 522 aaKnown RBP eCLIP5.74□□□□□ -1.49
RFFL-202ENST00000394597 PMPCBO75439 489 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 MYO1DO94832 1006 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 KRT6AP02538 564 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 CHRNA1P02708 482 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 KRT6BP04259 564 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 EDN1P05305 212 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 CSH1P0DML2 217 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 CSH2P0DML3 217 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 ETS1P14921 441 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 ADRA1BP35368 520 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 CDKN2BP42772 138 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 ZNF132P52740 706 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 COPZ1P61923 177 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 BST1Q10588 318 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 TUBA3CQ13748 450 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 TAF5Q15542 800 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 UGP2Q16851 508 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 MYLK3Q32MK0 819 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 IFNEQ86WN2 208 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 TCAIMQ8N3R3 496 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 ZCCHC9Q8N567 271 aaKnown RBP5.74□□□□□ -1.49
RFFL-202ENST00000394597 NIPA2Q8N8Q9 360 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 POC5Q8NA72 575 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 SMG8Q8ND04 991 aaKnown RBP5.74□□□□□ -1.49
RFFL-202ENST00000394597 ADCY4Q8NFM4 1077 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 NDRG1Q92597 394 aaKnown RBP5.74□□□□□ -1.49
RFFL-202ENST00000394597 HTRA1Q92743 480 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 SCLYQ96I15 445 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 CEP295NLQ96MC4 621 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 ZIC5Q96T25 663 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 ARPC5LQ9BPX5 153 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 LPIN3Q9BQK8 851 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 RBM22Q9NW64 420 aaKnown RBP eCLIP5.74□□□□□ -1.492e-7■■■■□ 22.2
RFFL-202ENST00000394597 SLC17A7Q9P2U7 560 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 DPP7Q9UHL4 492 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 SORCS3Q9UPU3 1222 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 CNTN6Q9UQ52 1028 aa5.74□□□□□ -1.49
RFFL-202ENST00000394597 FARP1Q9Y4F1 1045 aaPredicted RBP5.74□□□□□ -1.49
RFFL-202ENST00000394597 LINC00854A0A1B0GVQ3 168 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 TCRBV7S2A1N4TA0A589 114 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 FAM25AB3EWG3 89 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 FAM25CB3EWG5 89 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 FAM25GB3EWG6 89 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 CRTAMO95727 393 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 OR4Q2P0C623 313 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 HSPA1AP0DMV8 641 aaKnown RBP5.73□□□□□ -1.49
RFFL-202ENST00000394597 HSPA1BP0DMV9 641 aaKnown RBP5.73□□□□□ -1.49
RFFL-202ENST00000394597 GOT1P17174 413 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 CDH5P33151 784 aaPredicted RBP5.73□□□□□ -1.49
RFFL-202ENST00000394597 OR1D2P34982 312 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 RPL22P35268 128 aaKnown RBP5.73□□□□□ -1.49
RFFL-202ENST00000394597 SPRP35270 261 aaPredicted RBP5.73□□□□□ -1.49
RFFL-202ENST00000394597 MSX2P35548 267 aaPredicted RBP5.73□□□□□ -1.49
RFFL-202ENST00000394597 PPM1AP35813 382 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 RXRGP48443 463 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 CREMQ03060 361 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 GNA12Q03113 381 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 MGAT5Q09328 741 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 KIF19Q2TAC6 998 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 SDHAF4Q5VUM1 108 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 FUT10Q6P4F1 479 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 PSTKQ8IV42 348 aaKnown RBP5.73□□□□□ -1.49
RFFL-202ENST00000394597 MCUQ8NE86 351 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 TMEM40Q8WWA1 233 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 ZNF669Q96BR6 464 aaPredicted RBP5.73□□□□□ -1.49
RFFL-202ENST00000394597 HDAC11Q96DB2 347 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 PANX3Q96QZ0 392 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 VAT1Q99536 393 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 MIPEPQ99797 713 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 OSBPL11Q9BXB4 747 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 C12orf65Q9H3J6 166 aaKnown RBP5.73□□□□□ -1.49
RFFL-202ENST00000394597 AGO3Q9H9G7 860 aaKnown RBP5.73□□□□□ -1.49
RFFL-202ENST00000394597 AASDHPPTQ9NRN7 309 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 NSMCE4AQ9NXX6 385 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 GTSE1Q9NYZ3 720 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 SPG21Q9NZD8 308 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 SNTNA6NMZ2 147 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 RNF103O00237 685 aa5.73□□□□□ -1.49
RFFL-202ENST00000394597 FGF10O15520 208 aaPredicted RBP5.73□□□□□ -1.49
RFFL-202ENST00000394597 ITM2AO43736 263 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms