RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 CPNE1Q99829 537 aa14.77□□□□□ -0.04
VPS9D1-201ENST00000389386 FTHL17Q9BXU8 183 aa14.77□□□□□ -0.04
VPS9D1-201ENST00000389386 DHX35Q9H5Z1 703 aaKnown RBP14.77□□□□□ -0.04
VPS9D1-201ENST00000389386 SOX17Q9H6I2 414 aaPredicted RBP14.77□□□□□ -0.04
VPS9D1-201ENST00000389386 ADAMTS5Q9UNA0 930 aa14.77□□□□□ -0.04
VPS9D1-201ENST00000389386 AURKCQ9UQB9 309 aa14.77□□□□□ -0.04
VPS9D1-201ENST00000389386 VWA7Q9Y334 891 aa14.77□□□□□ -0.04
VPS9D1-201ENST00000389386 STYXL1Q9Y6J8 313 aa14.77□□□□□ -0.04
VPS9D1-201ENST00000389386 ADGRA2Q96PE1 1338 aa14.77□□□□□ -0.05
VPS9D1-201ENST00000389386 MLNP12872 115 aa14.77□□□□□ -0.05
VPS9D1-201ENST00000389386 EEF1B2P24534 225 aaKnown RBP14.77□□□□□ -0.05
VPS9D1-201ENST00000389386 MGAT1P26572 445 aa14.77□□□□□ -0.05
VPS9D1-201ENST00000389386 NAGLUP54802 743 aa14.77□□□□□ -0.05
VPS9D1-201ENST00000389386 SESN2P58004 480 aaPredicted RBP14.77□□□□□ -0.05
VPS9D1-201ENST00000389386 TRIM32Q13049 653 aa14.77□□□□□ -0.05
VPS9D1-201ENST00000389386 LIPMQ5VYY2 423 aa14.77□□□□□ -0.05
VPS9D1-201ENST00000389386 UGT3A1Q6NUS8 523 aa14.77□□□□□ -0.05
VPS9D1-201ENST00000389386 KIAA0408Q6ZU52 694 aa14.77□□□□□ -0.05
VPS9D1-201ENST00000389386 TFAP2DQ7Z6R9 452 aa14.77□□□□□ -0.05
VPS9D1-201ENST00000389386 AKAP14Q86UN6 197 aa14.77□□□□□ -0.05
VPS9D1-201ENST00000389386 CMTR2Q8IYT2 770 aaKnown RBP14.77□□□□□ -0.05
VPS9D1-201ENST00000389386 PELI3Q8N2H9 469 aa14.77□□□□□ -0.05
VPS9D1-201ENST00000389386 MFSD4AQ8N468 514 aa14.77□□□□□ -0.05
VPS9D1-201ENST00000389386 ZUFSPQ96AP4 578 aa14.77□□□□□ -0.05
VPS9D1-201ENST00000389386 ATXN7L3BQ96GX2 97 aa14.77□□□□□ -0.05
VPS9D1-201ENST00000389386 SLC45A3Q96JT2 553 aa14.77□□□□□ -0.05
VPS9D1-201ENST00000389386 ZNF668Q96K58 619 aaPredicted RBP14.77□□□□□ -0.05
VPS9D1-201ENST00000389386 IL22Q9GZX6 179 aa14.77□□□□□ -0.05
VPS9D1-201ENST00000389386 LHX5Q9H2C1 402 aa14.77□□□□□ -0.05
VPS9D1-201ENST00000389386 PIH1D1Q9NWS0 290 aaKnown RBP14.77□□□□□ -0.05
VPS9D1-201ENST00000389386 MTRRQ9UBK8 725 aa14.77□□□□□ -0.05
VPS9D1-201ENST00000389386 PCDHGA3Q9Y5H0 932 aa14.77□□□□□ -0.05
VPS9D1-201ENST00000389386 C19orf81C9J6K1 198 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 SDHDO14521 159 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 EI24O14681 340 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 MPOP05164 745 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 FASP25445 335 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 LRIT3Q3SXY7 679 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 BROXQ5VW32 411 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 C8orf82Q6P1X6 216 aaPredicted RBP14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 ABHD15Q6UXT9 468 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 PIGZQ86VD9 579 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 SLC22A16Q86VW1 577 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 MAELQ96JY0 434 aaKnown RBP14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 RBBP8Q99708 897 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 SH3GL1Q99961 368 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 ACE2Q9BYF1 805 aaPredicted RBP14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 MAGEE1Q9HCI5 957 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 SMPD3Q9NY59 655 aaPredicted RBP14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 PRELID1Q9Y255 219 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 PTPRFP10586 1907 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 CENPBD1B2RD01 187 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 AURKAO14965 403 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 KMOO15229 486 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 C2P06681 752 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 ENDOUP21128 410 aaKnown RBP14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 ZNF143P52747 638 aaPredicted RBP14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 ADARB1P78563 741 aaKnown RBP14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 CLCQ05315 142 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 PITRM1Q5JRX3 1037 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 FSTL4Q6MZW2 842 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 CRTC3Q6UUV7 619 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 ZYG11AQ6WRX3 759 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 LINC00299Q6ZSB3 139 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 SLC16A12Q6ZSM3 486 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 HEATR4Q86WZ0 1026 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 CDKL3Q8IVW4 592 aaPredicted RBP14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 TMEM151AQ8N4L1 468 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 KDM1BQ8NB78 822 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 CAB39LQ9H9S4 337 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 PCDH12Q9NPG4 1184 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 C8orf4Q9NR00 106 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 AP4E1Q9UPM8 1137 aa14.76□□□□□ -0.05
VPS9D1-201ENST00000389386 DHRS12A0PJE2 317 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 LRRIQ4A6NIV6 560 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 TPST1O60507 370 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 CXCR2P25025 360 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 SPRP35270 261 aaPredicted RBP14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 SLC7A2P52569 658 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 TMTC4Q5T4D3 741 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 CES3Q6UWW8 571 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 LAYNQ6UX15 382 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 RNF19BQ6ZMZ0 732 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 C12orf42Q96LP6 360 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 CLSTN3Q9BQT9 956 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 FUNDC2Q9BWH2 189 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 NMRK2Q9NPI5 230 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 GPATCH2LQ9NWQ4 482 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 HOXC10Q9NYD6 342 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 TLL2Q9Y6L7 1015 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 SPATA31C2B4DYI2 1134 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 SNAP29O95721 258 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 SBK3P0C264 359 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 IL10P22301 178 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 ELK4P28324 431 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 LIMK2P53671 638 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 MYL6P60660 151 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 CDC20Q12834 499 aa14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 CBX2Q14781 532 aaPredicted RBP14.75□□□□□ -0.05
VPS9D1-201ENST00000389386 MAPRE2Q15555 327 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms