RNA–Protein interactions for RNA: ENST00000384526.1

RNU6-880P-201, Transcript of RNA, U6 small nuclear 880, pseudogene, humanhuman

BASIC

Gene RNU6-880P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-880P-201ENST00000384526 ASPSCR1Q9BZE9 553 aa0.65□□□□□ -2.31
RNU6-880P-201ENST00000384526 DDX56Q9NY93 547 aaKnown RBP0.65□□□□□ -2.31
RNU6-880P-201ENST00000384526 POMT2Q9UKY4 750 aa0.65□□□□□ -2.31
RNU6-880P-201ENST00000384526 TRPC5Q9UL62 973 aaPredicted RBP0.65□□□□□ -2.31
RNU6-880P-201ENST00000384526 OGDHLQ9ULD0 1010 aa0.65□□□□□ -2.31
RNU6-880P-201ENST00000384526 IGKV6-21A0A0C4DH24 114 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 C1orf226A1L170 272 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 CFAP69A5D8W1 941 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 TCP11X1B4DZS4 312 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 J3KTA2 159 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 PHOX2AO14813 284 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 PLRG1O43660 514 aaKnown RBP0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 ZIC3O60481 467 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 CTNND1O60716 968 aaKnown RBP0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 IGHV4-39P01824 125 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 ANXA2P07355 339 aaKnown RBP0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 MMP2P08253 660 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 DHRS4L1P0CG22 281 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 PF4V1P10720 104 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 FCGR2AP12318 317 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 TRIM27P14373 513 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 PECAM1P16284 738 aaPredicted RBP0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 HOXB9P17482 250 aaPredicted RBP0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 VCAM1P19320 739 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 PRPH2P23942 346 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 PIGAP37287 484 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 CDKN1CP49918 316 aaPredicted RBP0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 POU5F1Q01860 360 aaKnown RBP0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 TBL3Q12788 808 aaKnown RBP0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 PMS2P11Q13670 270 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 RAPSNQ13702 412 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 FAM50AQ14320 339 aaKnown RBP0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 CSHL1Q14406 222 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 LPIN1Q14693 890 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 CNN3Q15417 329 aaKnown RBP0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 SLC5A9Q2M3M2 681 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 KCNT1Q5JUK3 1230 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 SEL1L3Q68CR1 1132 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 RNF44Q7L0R7 432 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 DGKHQ86XP1 1220 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 KIAA0319LQ8IZA0 1049 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 C1orf87Q8N0U7 546 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 SCML4Q8N228 414 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 ENDOVQ8N8Q3 282 aaKnown RBP0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 ATOH1Q92858 354 aaPredicted RBP0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 SCRN2Q96FV2 425 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 GPATCH1Q9BRR8 931 aaKnown RBP0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 RTBDNQ9BSG5 229 aaPredicted RBP0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 IFT27Q9BW83 186 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 TRIM6Q9C030 488 aaPredicted RBP0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 UPF2Q9HAU5 1272 aaKnown RBP0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 TMEM30AQ9NV96 361 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 INTS10Q9NVR2 710 aaKnown RBP0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 ZDHHC2Q9UIJ5 367 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 TPCN1Q9ULQ1 816 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 SLC12A4Q9UP95 1085 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 ZNF256Q9Y2P7 627 aaPredicted RBP0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 MOB4Q9Y3A3 225 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 LOXL2Q9Y4K0 774 aa0.64□□□□□ -2.31
RNU6-880P-201ENST00000384526 IGLV7-46A0A075B6I9 117 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 SRRM5B3KS81 715 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 F8W8V4 182 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 RASA4O43374 803 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 CER1O95813 267 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 HLA-DQA2P01906 255 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 CHATP28329 748 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 TMPOP42166 694 aaKnown RBP0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 GPR12P47775 334 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 BMXP51813 675 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 GAGE5Q13069 117 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 GAGE6Q13070 117 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 CAPSQ13938 189 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 TECRLQ5HYJ1 363 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 FFAR4Q5NUL3 377 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 TRIM65Q6PJ69 517 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 WDR63Q8IWG1 891 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 PARP8Q8N3A8 854 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 C2CD4CQ8TF44 421 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 DUSP19Q8WTR2 217 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 ABTB1Q969K4 478 aaPredicted RBP0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 CDCA5Q96FF9 252 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 CTRCQ99895 268 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 SOSTQ9BQB4 213 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 POLR3CQ9BUI4 534 aaPredicted RBP0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 TMEM120AQ9BXJ8 343 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 PCDHAC1Q9H158 963 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 TMEM60Q9H2L4 133 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 FKRPQ9H9S5 495 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 ZNF287Q9HBT7 754 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 WDR6Q9NNW5 1121 aaKnown RBP0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 ATAD3AQ9NVI7 634 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 CHPF2Q9P2E5 772 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 SPEF1Q9Y4P9 236 aa0.63□□□□□ -2.31
RNU6-880P-201ENST00000384526 IGLV5-45A0A087WSX0 123 aa0.62□□□□□ -2.31
RNU6-880P-201ENST00000384526 A0A096LPK6 155 aa0.62□□□□□ -2.31
RNU6-880P-201ENST00000384526 A0A1W2PPR1 153 aa0.62□□□□□ -2.31
RNU6-880P-201ENST00000384526 TMEM247A6NEH6 219 aa0.62□□□□□ -2.31
RNU6-880P-201ENST00000384526 TMEM178BH3BS89 294 aa0.62□□□□□ -2.31
RNU6-880P-201ENST00000384526 ZNF32P17041 273 aa0.62□□□□□ -2.31
RNU6-880P-201ENST00000384526 ITIH1P19827 911 aa0.62□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms