RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 FADS3Q9Y5Q0 445 aa17.82■□□□□ 0.44
CD9-202ENST00000382515 GOLGA6L10A0A0M3HER8 536 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 GOLGA6CA6NDK9 693 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 GOLGA6BA6NDN3 693 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 C10orf142B7Z368 130 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 AREL1O15033 823 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 FZD6O60353 706 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 PGLSO95336 258 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 PIGNO95427 931 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 GOLGA6DP0CG33 693 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 PAFAH1B1P43034 410 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 TNNT3P45378 269 aaPredicted RBP17.81■□□□□ 0.44
CD9-202ENST00000382515 DSC2Q02487 901 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 NIPAL4Q0D2K0 466 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 SIX1Q15475 284 aaPredicted RBP17.81■□□□□ 0.44
CD9-202ENST00000382515 PARP6Q2NL67 630 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 P3H1Q32P28 736 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 ANKRD20A2Q5SQ80 823 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 ANKRD20A1Q5TYW2 823 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 ANKRD20A3Q5VUR7 823 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 KIAA1161Q6NSJ0 714 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 CCDC70Q6NSX1 233 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 PRR23BQ6ZRT6 265 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 NYAP1Q6ZVC0 841 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 PARS2Q7L3T8 475 aaKnown RBP17.81■□□□□ 0.44
CD9-202ENST00000382515 RABEPKQ7Z6M1 372 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 TRIM69Q86WT6 500 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 RAVER1Q8IY67 606 aaKnown RBP17.81■□□□□ 0.44
CD9-202ENST00000382515 FAM160A2Q8N612 972 aaPredicted RBP17.81■□□□□ 0.44
CD9-202ENST00000382515 ATL2Q8NHH9 583 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 ASB12Q8WXK4 309 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 DNASE2BQ8WZ79 361 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 KCTD5Q9NXV2 234 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 GOLGA6AQ9NYA3 693 aa17.81■□□□□ 0.44
CD9-202ENST00000382515 UPK3BL1B0FP48 263 aa17.8■□□□□ 0.44
CD9-202ENST00000382515 UPK3BL2E5RIL1 263 aa17.8■□□□□ 0.44
CD9-202ENST00000382515 NEMP1O14524 444 aa17.8■□□□□ 0.44
CD9-202ENST00000382515 PSMD3O43242 534 aa17.8■□□□□ 0.44
CD9-202ENST00000382515 RNGTTO60942 597 aaKnown RBP17.8■□□□□ 0.44
CD9-202ENST00000382515 RETP07949 1114 aa17.8■□□□□ 0.44
CD9-202ENST00000382515 BCKDHBP21953 392 aa17.8■□□□□ 0.44
CD9-202ENST00000382515 CD86P42081 329 aa17.8■□□□□ 0.44
CD9-202ENST00000382515 METAP1P53582 386 aa17.8■□□□□ 0.44
CD9-202ENST00000382515 TAS2R38P59533 333 aa17.8■□□□□ 0.44
CD9-202ENST00000382515 RPS21P63220 83 aaKnown RBP17.8■□□□□ 0.44
CD9-202ENST00000382515 SKOR1P84550 965 aa17.8■□□□□ 0.44
CD9-202ENST00000382515 NHLH1Q02575 133 aa17.8■□□□□ 0.44
CD9-202ENST00000382515 SRSF5Q13243 272 aaKnown RBP17.8■□□□□ 0.44
CD9-202ENST00000382515 MPP3Q13368 585 aa17.8■□□□□ 0.44
CD9-202ENST00000382515 CYP1B1Q16678 543 aa17.8■□□□□ 0.44
CD9-202ENST00000382515 POM121L1PQ3SYA9 428 aa17.8■□□□□ 0.44
CD9-202ENST00000382515 KIAA0895LQ68EN5 471 aa17.8■□□□□ 0.44
CD9-202ENST00000382515 ADAT2Q7Z6V5 191 aaKnown RBP17.8■□□□□ 0.44
CD9-202ENST00000382515 PRPF39Q86UA1 669 aaKnown RBP17.8■□□□□ 0.44
CD9-202ENST00000382515 FRMD1Q8N878 549 aa17.8■□□□□ 0.44
CD9-202ENST00000382515 FAM71DQ8N9W8 422 aa17.8■□□□□ 0.44
CD9-202ENST00000382515 SUMF1Q8NBK3 374 aa17.8■□□□□ 0.44
CD9-202ENST00000382515 COG1Q8WTW3 980 aa17.8■□□□□ 0.44
CD9-202ENST00000382515 C1orf54Q8WWF1 131 aa17.8■□□□□ 0.44
CD9-202ENST00000382515 SCRN2Q96FV2 425 aa17.8■□□□□ 0.44
CD9-202ENST00000382515 TDRD1Q9BXT4 1180 aaKnown RBP17.8■□□□□ 0.44
CD9-202ENST00000382515 RSPH14Q9UHP6 348 aa17.8■□□□□ 0.44
CD9-202ENST00000382515 DMTF1Q9Y222 760 aa17.8■□□□□ 0.44
CD9-202ENST00000382515 PCDHB9Q9Y5E1 797 aa17.8■□□□□ 0.44
CD9-202ENST00000382515 MUC6Q6W4X9 2439 aa17.79■□□□□ 0.44
CD9-202ENST00000382515 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.79■□□□□ 0.44
CD9-202ENST00000382515 PRR5-ARHGAP8B1AHC4 643 aa17.79■□□□□ 0.44
CD9-202ENST00000382515 RIOK3O14730 519 aaKnown RBP17.79■□□□□ 0.44
CD9-202ENST00000382515 LATO43561 262 aa17.79■□□□□ 0.44
CD9-202ENST00000382515 FOXD2O60548 495 aaPredicted RBP17.79■□□□□ 0.44
CD9-202ENST00000382515 MMP2P08253 660 aa17.79■□□□□ 0.44
CD9-202ENST00000382515 CD68P34810 354 aaPredicted RBP17.79■□□□□ 0.44
CD9-202ENST00000382515 GEMP55040 296 aa17.79■□□□□ 0.44
CD9-202ENST00000382515 TMEM52BQ4KMG9 183 aa17.79■□□□□ 0.44
CD9-202ENST00000382515 LYSMD4Q5XG99 296 aa17.79■□□□□ 0.44
CD9-202ENST00000382515 B4GALNT4Q76KP1 1039 aa17.79■□□□□ 0.44
CD9-202ENST00000382515 HORMAD1Q86X24 394 aa17.79■□□□□ 0.44
CD9-202ENST00000382515 TMEFF1Q8IYR6 380 aa17.79■□□□□ 0.44
CD9-202ENST00000382515 PRELID2Q8N945 189 aa17.79■□□□□ 0.44
CD9-202ENST00000382515 C12orf50Q8NA57 414 aaPredicted RBP17.79■□□□□ 0.44
CD9-202ENST00000382515 CEP76Q8TAP6 659 aa17.79■□□□□ 0.44
CD9-202ENST00000382515 FAM174AQ8TBP5 190 aa17.79■□□□□ 0.44
CD9-202ENST00000382515 MS4A14Q96JA4 679 aa17.79■□□□□ 0.44
CD9-202ENST00000382515 FAM118BQ9BPY3 351 aa17.79■□□□□ 0.44
CD9-202ENST00000382515 TMEM121Q9BTD3 319 aa17.79■□□□□ 0.44
CD9-202ENST00000382515 GBA3Q9H227 469 aa17.79■□□□□ 0.44
CD9-202ENST00000382515 PCDH9Q9HC56 1237 aa17.79■□□□□ 0.44
CD9-202ENST00000382515 SUSD2Q9UGT4 822 aa17.79■□□□□ 0.44
CD9-202ENST00000382515 SMG5Q9UPR3 1016 aaKnown RBP17.79■□□□□ 0.44
CD9-202ENST00000382515 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.79■□□□□ 0.44
CD9-202ENST00000382515 ANKRD66B4E2M5 251 aa17.78■□□□□ 0.44
CD9-202ENST00000382515 LRP3O75074 770 aa17.78■□□□□ 0.44
CD9-202ENST00000382515 PCDH8O95206 1070 aa17.78■□□□□ 0.44
CD9-202ENST00000382515 CPP00450 1065 aa17.78■□□□□ 0.44
CD9-202ENST00000382515 CYP2A6P11509 494 aaPredicted RBP17.78■□□□□ 0.44
CD9-202ENST00000382515 GNSP15586 552 aa17.78■□□□□ 0.44
CD9-202ENST00000382515 CD27P26842 260 aa17.78■□□□□ 0.44
CD9-202ENST00000382515 DHPSP49366 369 aaPredicted RBP17.78■□□□□ 0.44
CD9-202ENST00000382515 EPHB1P54762 984 aa17.78■□□□□ 0.44
CD9-202ENST00000382515 CDK18Q07002 472 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms