RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 ETV4P43268 484 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 PPP5CP53041 499 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 PCBP1Q15365 356 aaKnown RBP eCLIP9.44□□□□□ -0.9
PTPRA-204ENST00000380393 TOMM20Q15388 145 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 MTX3Q5HYI7 312 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 RINT1Q6NUQ1 792 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 DBX2Q6ZNG2 339 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 NOXA1Q86UR1 476 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 RDH13Q8NBN7 331 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 TFAP2CQ92754 450 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 ATP6V1E2Q96A05 226 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 ST6GAL2Q96JF0 529 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 FAM118BQ9BPY3 351 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 TINAGL1Q9GZM7 467 aaPredicted RBP9.44□□□□□ -0.9
PTPRA-204ENST00000380393 NUDT5Q9UKK9 219 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 EDARQ9UNE0 448 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 CACNA1SQ13698 1873 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 M0R3G1 203 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 MEIS1O00470 390 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 CKMT2P17540 419 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 CYP2A7P20853 494 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 HTR3AP46098 478 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 NUDT2P50583 147 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 ACTR2P61160 394 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 CYP4F2P78329 520 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 PCDH1Q08174 1060 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 CYP4F3Q08477 520 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 DRAP1Q14919 205 aaPredicted RBP9.44□□□□□ -0.9
PTPRA-204ENST00000380393 NHSL2Q5HYW2 709 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 ANKS1BQ7Z6G8 1248 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 SP8Q8IXZ3 490 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 IL17RDQ8NFM7 739 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 PIGSQ96S52 555 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 KCTD14Q9BQ13 255 aaPredicted RBP9.44□□□□□ -0.9
PTPRA-204ENST00000380393 OR51B5Q9H339 312 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 PPCSQ9HAB8 311 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 TAS2R14Q9NYV8 317 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 SPATA2Q9UM82 520 aa9.44□□□□□ -0.9
PTPRA-204ENST00000380393 TRIM49D1C9J1S8 452 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 E7ENX8 843 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 KLF11O14901 512 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 FAM189A1O60320 539 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 MAFO75444 373 aaPredicted RBP9.43□□□□□ -0.9
PTPRA-204ENST00000380393 CLIC3O95833 236 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 PTTG1O95997 202 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 SLC4A1P02730 911 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 SERPINB10P48595 397 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 MS4A2Q01362 244 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 ECM1Q16610 540 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 STEAP3Q658P3 488 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 SCUBE3Q8IX30 993 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 ZCCHC9Q8N567 271 aaKnown RBP9.43□□□□□ -0.9
PTPRA-204ENST00000380393 FNDC5Q8NAU1 212 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 ENKURQ8TC29 256 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 SYTL5Q8TDW5 730 aaPredicted RBP9.43□□□□□ -0.9
PTPRA-204ENST00000380393 PPWD1Q96BP3 646 aaKnown RBP9.43□□□□□ -0.9
PTPRA-204ENST00000380393 MARK4Q96L34 752 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 ZNF578Q96N58 590 aaPredicted RBP9.43□□□□□ -0.9
PTPRA-204ENST00000380393 CNPY3Q9BT09 278 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 ZC3H12CQ9C0D7 883 aaKnown RBP9.43□□□□□ -0.9
PTPRA-204ENST00000380393 RAVER2Q9HCJ3 691 aaKnown RBP9.43□□□□□ -0.9
PTPRA-204ENST00000380393 SPATA6Q9NWH7 488 aaPredicted RBP9.43□□□□□ -0.9
PTPRA-204ENST00000380393 SMOXQ9NWM0 555 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 DUS2Q9NX74 493 aaKnown RBP9.43□□□□□ -0.9
PTPRA-204ENST00000380393 CD274Q9NZQ7 290 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 CLUHO75153 1309 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 GTPBP10A4D1E9 387 aaKnown RBP9.43□□□□□ -0.9
PTPRA-204ENST00000380393 SH3D21A4FU49 640 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 SEC14L2O76054 403 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 SEC24AO95486 1093 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 OSBPP22059 807 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 DDOSTP39656 456 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 IL12RB1P42701 662 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 BPIFB3P59826 476 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 RELQ04864 619 aaPredicted RBP9.43□□□□□ -0.9
PTPRA-204ENST00000380393 GPATCH4Q5T3I0 446 aaKnown RBP9.43□□□□□ -0.9
PTPRA-204ENST00000380393 PRSS42Q7Z5A4 293 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 ARHGEF19Q8IW93 802 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 GLB1L3Q8NCI6 653 aaPredicted RBP9.43□□□□□ -0.9
PTPRA-204ENST00000380393 SLC7A14Q8TBB6 771 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 CYGBQ8WWM9 190 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 USP13Q92995 863 aaPredicted RBP9.43□□□□□ -0.9
PTPRA-204ENST00000380393 SIPA1Q96FS4 1042 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 PAFAH2Q99487 392 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 BBS2Q9BXC9 721 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.43□□□□□ -0.9
PTPRA-204ENST00000380393 C2orf40Q9H1Z8 148 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 DCP1AQ9NPI6 582 aaPredicted RBP9.43□□□□□ -0.9
PTPRA-204ENST00000380393 KIF17Q9P2E2 1029 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 GTF2IRD1Q9UHL9 959 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 AFG3L2Q9Y4W6 797 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 FRMPD2Q68DX3 1309 aaPredicted RBP9.43□□□□□ -0.9
PTPRA-204ENST00000380393 COL11A2P13942 1736 aaPredicted RBP9.43□□□□□ -0.9
PTPRA-204ENST00000380393 A0A1B0GUL6 1792 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 G3V3G9 751 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 SLURP2P0DP57 97 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 COX4I1P13073 169 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 TCN1P20061 433 aaPredicted RBP9.43□□□□□ -0.9
PTPRA-204ENST00000380393 MYF6P23409 242 aa9.43□□□□□ -0.9
PTPRA-204ENST00000380393 EIF2DP41214 584 aaKnown RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms