RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 PPP1R15BQ5SWA1 713 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 ZFYVE27Q5T4F4 411 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 ENPP7Q6UWV6 458 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 GDPD4Q6W3E5 623 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 CLEC17AQ6ZS10 378 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 MICALCLQ6ZW33 695 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 MARK2Q7KZI7 788 aaKnown RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 B3GNT8Q7Z7M8 397 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 PHF13Q86YI8 300 aaPredicted RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 RTL3Q8N8U3 475 aaKnown RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 MSANTD4Q8NCY6 345 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 ZNF548Q8NEK5 533 aaPredicted RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 PCDH19Q8TAB3 1148 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 ERGIC2Q96RQ1 377 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 TTYH3Q9C0H2 523 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 OSGEPQ9NPF4 335 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 PCDH12Q9NPG4 1184 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 TMEM248Q9NWD8 314 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 SAE1Q9UBE0 346 aaPredicted RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 ATXN7L1Q9ULK2 861 aaPredicted RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 CLCA2Q9UQC9 943 aa4.72□□□□□ -1.65
C9orf72-203ENST00000380003 ARHGEF17Q96PE2 2063 aaPredicted RBP4.72□□□□□ -1.65
C9orf72-203ENST00000380003 ASH1LQ9NR48 2969 aaKnown RBP4.71□□□□□ -1.65
C9orf72-203ENST00000380003 LY6G6EA0A0G2JKS1 128 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 KDELR3O43731 214 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 RFPL3O75679 317 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 FUCA1P04066 466 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 ITGB7P26010 798 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 CASP14P31944 242 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 LIG3P49916 1009 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 CCR5P51681 352 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 RPS21P63220 83 aaKnown RBP4.71□□□□□ -1.66
C9orf72-203ENST00000380003 ITKQ08881 620 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 EIF2B5Q13144 721 aaKnown RBP4.71□□□□□ -1.66
C9orf72-203ENST00000380003 SERINC3Q13530 473 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 IRF4Q15306 451 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 UGP2Q16851 508 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 WSCD2Q2TBF2 565 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 CFAP58Q5T655 872 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 FAXCQ5TGI0 409 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 DOK6Q6PKX4 331 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 RFX8Q6ZV50 586 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 STRADAQ7RTN6 431 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 TSPAN33Q86UF1 283 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 PGBD5Q8N414 524 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 ZNF557Q8N988 423 aaPredicted RBP4.71□□□□□ -1.66
C9orf72-203ENST00000380003 RCBTB1Q8NDN9 531 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 ATXN7L3BQ96GX2 97 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 CDC6Q99741 560 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 EPAS1Q99814 870 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 CNPY3Q9BT09 278 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 CLPBQ9H078 707 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 LHX3Q9UBR4 397 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 DAAM1Q9Y4D1 1078 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 PLEKHM1Q9Y4G2 1056 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 PAXBP1Q9Y5B6 917 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 ST14Q9Y5Y6 855 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 U3KQA8 63 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 CENPEQ02224 2701 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 SPTY2D1-AS1A0A0U1RR47 76 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 YY2O15391 372 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 PRPSAP2O60256 369 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 CALB1P05937 261 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 PIRTP0C851 137 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 C6P13671 934 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 CKMT2P17540 419 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 XPAP23025 273 aaPredicted RBP4.71□□□□□ -1.66
C9orf72-203ENST00000380003 AK4P27144 223 aaPredicted RBP4.71□□□□□ -1.66
C9orf72-203ENST00000380003 AKT2P31751 481 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 ETV3P41162 512 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 DPP6P42658 865 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 PTPN9P43378 593 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 UBASH3AP57075 661 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 SNRPD1P62314 119 aaKnown RBP4.71□□□□□ -1.66
C9orf72-203ENST00000380003 FANCCQ00597 558 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 NR1I3Q14994 352 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 HGSNATQ68CP4 663 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 USP53Q70EK8 1073 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 KANSL1Q7Z3B3 1105 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 TRIM69Q86WT6 500 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 ZNF677Q86XU0 584 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 KDM1BQ8NB78 822 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 TMIEQ8NEW7 156 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 SKA1Q96BD8 255 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 CENPTQ96BT3 561 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 PPP1R16AQ96I34 528 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 CCDC114Q96M63 670 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 PPP1R9BQ96SB3 815 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 SYT11Q9BT88 431 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 LRRC61Q9BV99 259 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 BRD8Q9H0E9 1235 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 TMEM168Q9H0V1 697 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 SPTLC3Q9NUV7 552 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 RRN3Q9NYV6 651 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 APOBEC3BQ9UH17 382 aaKnown RBP4.71□□□□□ -1.66
C9orf72-203ENST00000380003 ANAPC7Q9UJX3 599 aa4.71□□□□□ -1.66
C9orf72-203ENST00000380003 ANKRD62A6NC57 917 aa4.7□□□□□ -1.66
C9orf72-203ENST00000380003 TMEM191CA6NGB0 347 aa4.7□□□□□ -1.66
C9orf72-203ENST00000380003 UPK3BL1B0FP48 263 aa4.7□□□□□ -1.66
C9orf72-203ENST00000380003 UPK3BL2E5RIL1 263 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms