RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 C10orf107Q8IVU9 208 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 ARHGAP24Q8N264 748 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.28□□□□□ -1.08
UBR4-202ENST00000375224 TTC9BQ8N6N2 239 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 LSM14AQ8ND56 463 aaKnown RBP8.28□□□□□ -1.08
UBR4-202ENST00000375224 FBXO22Q8NEZ5 403 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 ZNF296Q8WUU4 475 aaPredicted RBP8.28□□□□□ -1.08
UBR4-202ENST00000375224 SLC7A6OSQ96CW6 309 aaPredicted RBP8.28□□□□□ -1.08
UBR4-202ENST00000375224 ZNF599Q96NL3 588 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 IRF2BPLQ9H1B7 796 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 TLE6Q9H808 572 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 NMRAL1Q9HBL8 299 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 HSFX1Q9UBD0 423 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 SLC39A10Q9ULF5 831 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 TRIM33Q9UPN9 1127 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 TMA7Q9Y2S6 64 aaKnown RBP8.28□□□□□ -1.08
UBR4-202ENST00000375224 GREB1Q4ZG55 1949 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 MAP3K13O43283 966 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 VAPBO95292 243 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 CBX6O95503 412 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 PEX11BO96011 259 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 PBX3P40426 434 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 CD97P48960 835 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 CCNG1P51959 295 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 ABCE1P61221 599 aaKnown RBP8.28□□□□□ -1.08
UBR4-202ENST00000375224 CYLC2Q14093 348 aaPredicted RBP8.28□□□□□ -1.08
UBR4-202ENST00000375224 SLC8B1Q6J4K2 584 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 SIX5Q8N196 739 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 CRIPAKQ8N1N5 446 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 GPR152Q8TDT2 470 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 PABPC5Q96DU9 382 aaKnown RBP8.28□□□□□ -1.08
UBR4-202ENST00000375224 ATXN7L3BQ96GX2 97 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 RILPQ96NA2 401 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 BTBD10Q9BSF8 475 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 MRGBPQ9NV56 204 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 SAGE1Q9NXZ1 904 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 MTRRQ9UBK8 725 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 APOBEC2Q9Y235 224 aaKnown RBP8.28□□□□□ -1.08
UBR4-202ENST00000375224 LRRC42Q9Y546 428 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 CDY1Q9Y6F8 540 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 CARNS1A5YM72 827 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 MAGEA13PA6NCF6 341 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 TRIM13O60858 407 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 CNTN5O94779 1100 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 TBX18O95935 607 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 TOP3BO95985 862 aaKnown RBP8.28□□□□□ -1.08
UBR4-202ENST00000375224 SERPINA6P08185 405 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 TACR2P21452 398 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 OR1E1P30953 314 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 SLC11A2P49281 568 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 HARS2P49590 506 aaKnown RBP8.28□□□□□ -1.08
UBR4-202ENST00000375224 HK2P52789 917 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 GRM3Q14832 879 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 C5orf22Q49AR2 442 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 ALFQ53S48 1182 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 SNX30Q5VWJ9 437 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 KLHDC10Q6PID8 442 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 ZCCHC23Q6ZST2 131 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 PPFIBP2Q8ND30 876 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 AZIN2Q96A70 460 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 PTCD3Q96EY7 689 aaKnown RBP8.28□□□□□ -1.08
UBR4-202ENST00000375224 B3GALT6Q96L58 329 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 TBC1D10AQ9BXI6 508 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 ATP13A1Q9HD20 1204 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 TREX1Q9NSU2 369 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 SATB2Q9UPW6 733 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 DNAJC16Q9Y2G8 782 aa8.28□□□□□ -1.08
UBR4-202ENST00000375224 MIA3Q5JRA6 1907 aa8.27□□□□□ -1.08
UBR4-202ENST00000375224 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.27□□□□□ -1.08
UBR4-202ENST00000375224 TRIM64CA6NLI5 447 aa8.27□□□□□ -1.08
UBR4-202ENST00000375224 SOAT2O75908 522 aa8.27□□□□□ -1.08
UBR4-202ENST00000375224 KLHL2O95198 593 aa8.27□□□□□ -1.08
UBR4-202ENST00000375224 HMBSP08397 361 aa8.27□□□□□ -1.08
UBR4-202ENST00000375224 KITP10721 976 aa8.27□□□□□ -1.08
UBR4-202ENST00000375224 ACADSP16219 412 aa8.27□□□□□ -1.08
UBR4-202ENST00000375224 ARCN1P48444 511 aaKnown RBP8.27□□□□□ -1.08
UBR4-202ENST00000375224 SLC12A2P55011 1212 aa8.27□□□□□ -1.08
UBR4-202ENST00000375224 SERINC3Q13530 473 aa8.27□□□□□ -1.08
UBR4-202ENST00000375224 SMAD1Q15797 465 aaKnown RBP8.27□□□□□ -1.08
UBR4-202ENST00000375224 RABGAP1LQ5R372 815 aa8.27□□□□□ -1.08
UBR4-202ENST00000375224 WASHC2DQ5SRD0 308 aa8.27□□□□□ -1.08
UBR4-202ENST00000375224 TMCO4Q5TGY1 634 aa8.27□□□□□ -1.08
UBR4-202ENST00000375224 ESRP1Q6NXG1 681 aaKnown RBP8.27□□□□□ -1.08
UBR4-202ENST00000375224 GALNT7Q86SF2 657 aa8.27□□□□□ -1.08
UBR4-202ENST00000375224 C2CD4AQ8NCU7 369 aaPredicted RBP8.27□□□□□ -1.08
UBR4-202ENST00000375224 SH3TC2Q8TF17 1288 aa8.27□□□□□ -1.08
UBR4-202ENST00000375224 GIPC2Q8TF65 315 aa8.27□□□□□ -1.08
UBR4-202ENST00000375224 IGSF8Q969P0 613 aa8.27□□□□□ -1.08
UBR4-202ENST00000375224 POLR1EQ9GZS1 481 aaKnown RBP8.27□□□□□ -1.08
UBR4-202ENST00000375224 MAGEH1Q9H213 219 aa8.27□□□□□ -1.08
UBR4-202ENST00000375224 HIPK3Q9H422 1215 aa8.27□□□□□ -1.08
UBR4-202ENST00000375224 DNAJC28Q9NX36 388 aa8.27□□□□□ -1.08
UBR4-202ENST00000375224 C6orf203Q9P0P8 240 aaPredicted RBP8.27□□□□□ -1.08
UBR4-202ENST00000375224 ACOT9Q9Y305 439 aa8.27□□□□□ -1.08
UBR4-202ENST00000375224 TRIM17Q9Y577 477 aa8.27□□□□□ -1.08
UBR4-202ENST00000375224 A0A087X1B8 175 aa8.27□□□□□ -1.09
UBR4-202ENST00000375224 NT5C1B-RDH14C9J2C7 533 aa8.27□□□□□ -1.09
UBR4-202ENST00000375224 J3KR12 359 aa8.27□□□□□ -1.09
UBR4-202ENST00000375224 ACSL4O60488 711 aa8.27□□□□□ -1.09
UBR4-202ENST00000375224 PQBP1O60828 265 aaKnown RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms