RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 SGSHP51688 502 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 MSLNQ13421 630 aaPredicted RBP16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 ZNF235Q14590 738 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 NXNQ6DKJ4 435 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 RIPOR1Q6ZS17 1223 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 FRMD7Q6ZUT3 714 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 LRRC49Q8IUZ0 686 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 DENND1CQ8IV53 801 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 LSMEM2Q8N112 164 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 ENDOVQ8N8Q3 282 aaKnown RBP16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 ANKRD49Q8WVL7 239 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 STMN2Q93045 179 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 TBATAQ96M53 351 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 SIKE1Q9BRV8 207 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 TARM1B6A8C7 271 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 TSPAN3O60637 253 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 KLHL2O95198 593 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 ATXN1LP0C7T5 689 aaKnown RBP16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 COPAP53621 1224 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 PRAMEP78395 509 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 HTRA3P83110 453 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 CUL3Q13618 768 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 PPM1LQ5SGD2 360 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 FAM117BQ6P1L5 589 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 NPAS4Q8IUM7 802 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 OR13C4Q8NGS5 318 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 PXYLP1Q8TE99 480 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 NRG4Q8WWG1 115 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 SEPT8Q92599 483 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 FAM167BQ9BTA0 163 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 DRC3Q9H069 523 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 POMKQ9H5K3 350 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 ATP13A1Q9HD20 1204 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 TCF7L2Q9NQB0 619 aa16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 ZFP37Q9Y6Q3 630 aaPredicted RBP16.1■□□□□ 0.17
CNKSR1-202ENST00000374253 TMEM114B3SHH9 223 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 F5H5T6 163 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 TM7SF2O76062 418 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 IGLV3-27P01718 113 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 CCDC166P0CW27 439 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 TFEBP19484 476 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 HADHAP40939 763 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 RPL14P50914 215 aaKnown RBP16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 C1orf146Q5VVC0 180 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 HIPK4Q8NE63 616 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 PTCD2Q8WV60 388 aaKnown RBP16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 PHF21BQ96EK2 531 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 IFT43Q96FT9 208 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 DNAJC1Q96KC8 554 aaKnown RBP16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 NSMCE3Q96MG7 304 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 CYP2S1Q96SQ9 504 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 UNC93B1Q9H1C4 597 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 OLA1Q9NTK5 396 aaKnown RBP16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 FNDC3AQ9Y2H6 1198 aaKnown RBP16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 A0A0U1RQS6 177 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 DRGXA6NNA5 263 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 TBC1D4O60343 1298 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 TSPAN8P19075 237 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 RGRP47804 291 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 CDKN2DP55273 166 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 BFSP2Q13515 415 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 LSM12Q3MHD2 195 aaKnown RBP16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 C16orf59Q7L2K0 433 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 EXT2Q93063 718 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 WBP2Q969T9 261 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 RSRC1Q96IZ7 334 aaKnown RBP16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 PRKD2Q9BZL6 878 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 MRM3Q9HC36 420 aaKnown RBP16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 GPAMQ9HCL2 828 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 IGSF5Q9NSI5 407 aa16.09■□□□□ 0.17
CNKSR1-202ENST00000374253 FNDC1Q4ZHG4 1894 aaPredicted RBP16.08■□□□□ 0.17
CNKSR1-202ENST00000374253 A0A088AWK7 358 aa16.08■□□□□ 0.17
CNKSR1-202ENST00000374253 MATN2O00339 956 aa16.08■□□□□ 0.17
CNKSR1-202ENST00000374253 GRID2O43424 1007 aa16.08■□□□□ 0.17
CNKSR1-202ENST00000374253 IL10RBQ08334 325 aa16.08■□□□□ 0.17
CNKSR1-202ENST00000374253 PTPRRQ15256 657 aa16.08■□□□□ 0.17
CNKSR1-202ENST00000374253 TBCCQ15814 346 aa16.08■□□□□ 0.17
CNKSR1-202ENST00000374253 SEL1L3Q68CR1 1132 aa16.08■□□□□ 0.17
CNKSR1-202ENST00000374253 CILP2Q8IUL8 1156 aa16.08■□□□□ 0.17
CNKSR1-202ENST00000374253 ARHGAP24Q8N264 748 aa16.08■□□□□ 0.17
CNKSR1-202ENST00000374253 TEX26Q8N6G2 289 aa16.08■□□□□ 0.17
CNKSR1-202ENST00000374253 CATSPER2Q96P56 530 aa16.08■□□□□ 0.17
CNKSR1-202ENST00000374253 LENG8Q96PV6 779 aaPredicted RBP16.08■□□□□ 0.17
CNKSR1-202ENST00000374253 VN1R3Q9BXE9 311 aa16.08■□□□□ 0.17
CNKSR1-202ENST00000374253 MRPL46Q9H2W6 279 aaKnown RBP16.08■□□□□ 0.17
CNKSR1-202ENST00000374253 MMADHCQ9H3L0 296 aaPredicted RBP16.08■□□□□ 0.17
CNKSR1-202ENST00000374253 STN1Q9H668 368 aaKnown RBP16.08■□□□□ 0.17
CNKSR1-202ENST00000374253 ARNT2Q9HBZ2 717 aa16.08■□□□□ 0.17
CNKSR1-202ENST00000374253 VPS45Q9NRW7 570 aa16.08■□□□□ 0.17
CNKSR1-202ENST00000374253 RAP2CQ9Y3L5 183 aa16.08■□□□□ 0.17
CNKSR1-202ENST00000374253 LDB2O43679 373 aa16.08■□□□□ 0.16
CNKSR1-202ENST00000374253 MAGEC1O60732 1142 aa16.08■□□□□ 0.16
CNKSR1-202ENST00000374253 SKAP2O75563 359 aaPredicted RBP16.08■□□□□ 0.16
CNKSR1-202ENST00000374253 SEC24AO95486 1093 aa16.08■□□□□ 0.16
CNKSR1-202ENST00000374253 APOA4P06727 396 aa16.08■□□□□ 0.16
CNKSR1-202ENST00000374253 CRABP2P29373 138 aa16.08■□□□□ 0.16
CNKSR1-202ENST00000374253 PSEN1P49768 467 aa16.08■□□□□ 0.16
CNKSR1-202ENST00000374253 RAP1GDS1P52306 607 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms