RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 OLIG2Q13516 323 aa14.77□□□□□ -0.04
SMPDL3B-201ENST00000373888 ELAVL3Q14576 367 aaKnown RBP14.77□□□□□ -0.04
SMPDL3B-201ENST00000373888 PCSK7Q16549 785 aa14.77□□□□□ -0.04
SMPDL3B-201ENST00000373888 HSF5Q4G112 596 aaPredicted RBP14.77□□□□□ -0.04
SMPDL3B-201ENST00000373888 C2orf27AQ580R0 203 aa14.77□□□□□ -0.04
SMPDL3B-201ENST00000373888 LRRC8BQ6P9F7 803 aa14.77□□□□□ -0.04
SMPDL3B-201ENST00000373888 CAND1Q86VP6 1230 aaKnown RBP14.77□□□□□ -0.04
SMPDL3B-201ENST00000373888 LRIG1Q96JA1 1093 aa14.77□□□□□ -0.04
SMPDL3B-201ENST00000373888 SERPINB12Q96P63 405 aa14.77□□□□□ -0.04
SMPDL3B-201ENST00000373888 ZIM3Q96PE6 472 aa14.77□□□□□ -0.04
SMPDL3B-201ENST00000373888 PLCD4Q9BRC7 762 aa14.77□□□□□ -0.04
SMPDL3B-201ENST00000373888 FICDQ9BVA6 458 aa14.77□□□□□ -0.04
SMPDL3B-201ENST00000373888 PHACTR1Q9C0D0 580 aa14.77□□□□□ -0.04
SMPDL3B-201ENST00000373888 ZDHHC6Q9H6R6 413 aa14.77□□□□□ -0.04
SMPDL3B-201ENST00000373888 ARNT2Q9HBZ2 717 aa14.77□□□□□ -0.04
SMPDL3B-201ENST00000373888 XAB2Q9HCS7 855 aaKnown RBP14.77□□□□□ -0.04
SMPDL3B-201ENST00000373888 CASS4Q9NQ75 786 aa14.77□□□□□ -0.04
SMPDL3B-201ENST00000373888 VPS18Q9P253 973 aa14.77□□□□□ -0.04
SMPDL3B-201ENST00000373888 NDRG2Q9UN36 371 aaKnown RBP14.77□□□□□ -0.04
SMPDL3B-201ENST00000373888 MRPS17Q9Y2R5 130 aaKnown RBP14.77□□□□□ -0.04
SMPDL3B-201ENST00000373888 PCDHGC4Q9Y5F7 938 aa14.77□□□□□ -0.04
SMPDL3B-201ENST00000373888 WASF2Q9Y6W5 498 aa14.77□□□□□ -0.04
SMPDL3B-201ENST00000373888 AP3B1O00203 1094 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 FZD6O60353 706 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 USP12O75317 370 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 AGTP01019 485 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 PRLP01236 227 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 CHRNB1P11230 501 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 HSD17B3P37058 310 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 GRIA1P42261 906 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 MAGEA3P43357 314 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 DHX9Q08211 1270 aaKnown RBP14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 TERF2Q15554 542 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 SLC1A5Q15758 541 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 TJAP1Q5JTD0 557 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 DENND5AQ6IQ26 1287 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 CAMK1DQ8IU85 385 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 SIX5Q8N196 739 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 SYNPOQ8N3V7 929 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 SPOCK2Q92563 424 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 IFT43Q96FT9 208 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 ZNF641Q96N77 438 aaPredicted RBP14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 TXLNGYQ9BZA5 131 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 LTB4R2Q9NPC1 389 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 PRSS16Q9NQE7 514 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 PSD3Q9NYI0 1048 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 IL36AQ9UHA7 158 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 KANSL1LA0AUZ9 987 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 ADAM23O75077 832 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 PIGNO95427 931 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 KLF8O95600 359 aaPredicted RBP14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 NDST3O95803 873 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 CTSLP07711 333 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 ATXN1LP0C7T5 689 aaKnown RBP14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 HLA-DPA1P20036 260 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 TARSP26639 723 aaKnown RBP14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 ARL4CP56559 192 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 CDH17Q12864 832 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 CAMK2GQ13555 558 aaPredicted RBP14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 LRRC32Q14392 662 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 HIF1AQ16665 826 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 SDE2Q6IQ49 451 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 PDIK1LQ8N165 341 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 STK40Q8N2I9 435 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 TXNDC5Q8NBS9 432 aaKnown RBP14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 TMIEQ8NEW7 156 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 OR52K1Q8NGK4 314 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 UBLCP1Q8WVY7 318 aaPredicted RBP14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 OR8D1Q8WZ84 308 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 ECHDC3Q96DC8 303 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 PWWP2AQ96N64 755 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 NELL2Q99435 816 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 APOL2Q9BQE5 337 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 OSBPL1AQ9BXW6 950 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 SUV39H2Q9H5I1 410 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 CHKBQ9Y259 395 aa14.76□□□□□ -0.05
SMPDL3B-201ENST00000373888 E7ESA3 106 aa14.75□□□□□ -0.05
SMPDL3B-201ENST00000373888 SYNCRIPO60506 623 aaKnown RBP14.75□□□□□ -0.05
SMPDL3B-201ENST00000373888 LEFTY1O75610 366 aa14.75□□□□□ -0.05
SMPDL3B-201ENST00000373888 PGLSO95336 258 aa14.75□□□□□ -0.05
SMPDL3B-201ENST00000373888 PRNPP04156 253 aa14.75□□□□□ -0.05
SMPDL3B-201ENST00000373888 FGF1P05230 155 aa14.75□□□□□ -0.05
SMPDL3B-201ENST00000373888 PDHA1P08559 390 aa14.75□□□□□ -0.05
SMPDL3B-201ENST00000373888 WASP42768 502 aa14.75□□□□□ -0.05
SMPDL3B-201ENST00000373888 RPL26P61254 145 aaKnown RBP14.75□□□□□ -0.05
SMPDL3B-201ENST00000373888 ZXDAP98168 799 aa14.75□□□□□ -0.05
SMPDL3B-201ENST00000373888 SIRPB2Q5JXA9 342 aa14.75□□□□□ -0.05
SMPDL3B-201ENST00000373888 FNBP1LQ5T0N5 605 aa14.75□□□□□ -0.05
SMPDL3B-201ENST00000373888 ARMC12Q5T9G4 340 aa14.75□□□□□ -0.05
SMPDL3B-201ENST00000373888 GDPD4Q6W3E5 623 aa14.75□□□□□ -0.05
SMPDL3B-201ENST00000373888 KDELC2Q7Z4H8 507 aa14.75□□□□□ -0.05
SMPDL3B-201ENST00000373888 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.75□□□□□ -0.05
SMPDL3B-201ENST00000373888 RPLP0P6Q8NHW5 317 aa14.75□□□□□ -0.05
SMPDL3B-201ENST00000373888 GRIN3AQ8TCU5 1115 aa14.75□□□□□ -0.05
SMPDL3B-201ENST00000373888 HCAR2Q8TDS4 363 aa14.75□□□□□ -0.05
SMPDL3B-201ENST00000373888 NECAB3Q96P71 396 aaPredicted RBP14.75□□□□□ -0.05
SMPDL3B-201ENST00000373888 FAM129BQ96TA1 746 aa14.75□□□□□ -0.05
SMPDL3B-201ENST00000373888 ADGRE3Q9BY15 652 aa14.75□□□□□ -0.05
SMPDL3B-201ENST00000373888 PPM1HQ9ULR3 514 aa14.75□□□□□ -0.05
SMPDL3B-201ENST00000373888 RPL26L1Q9UNX3 145 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms