RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 TMEM161BQ8NDZ6 487 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 CAB39LQ9H9S4 337 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 ING3Q9NXR8 418 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 CDH9Q9ULB4 789 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 ANKDD1BA6NHY2 528 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 ZBTB14O43829 449 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 RPL21P46778 160 aaKnown RBP14.42□□□□□ -0.1
TRAF1-201ENST00000373887 CDC42P60953 191 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 GCNT1Q02742 428 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 OFCC1Q8IZS5 231 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 TNKS2Q9H2K2 1166 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 IKZF4Q9H2S9 585 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 RRN3Q9NYV6 651 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 IKZF3Q9UKT9 509 aa14.42□□□□□ -0.1
TRAF1-201ENST00000373887 TPP1O14773 563 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 SEPT4O43236 478 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 PDHA2P29803 388 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 SEC13P55735 322 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 USP46P62068 366 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 SMAD3P84022 425 aaKnown RBP14.41□□□□□ -0.1
TRAF1-201ENST00000373887 EFCAB3Q8N7B9 438 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 BRD9Q9H8M2 597 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 PCDH9Q9HC56 1237 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 SALL3Q9BXA9 1300 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 FAM92AA1XBS5 289 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 ZSCAN5DPP0CG00 497 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 ARF4P18085 180 aaPredicted RBP14.41□□□□□ -0.1
TRAF1-201ENST00000373887 IFI35P80217 286 aaPredicted RBP14.41□□□□□ -0.1
TRAF1-201ENST00000373887 PIGZQ86VD9 579 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 MRIQ9BWK5 157 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 POLR1EQ9GZS1 481 aaKnown RBP14.41□□□□□ -0.1
TRAF1-201ENST00000373887 CLN6Q9NWW5 311 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 ZSCAN5CA6NGD5 496 aaPredicted RBP14.41□□□□□ -0.1
TRAF1-201ENST00000373887 RBMXL2O75526 392 aaKnown RBP14.41□□□□□ -0.1
TRAF1-201ENST00000373887 CYP2A13Q16696 494 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 GPR158Q5T848 1215 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 OR7A2PQ8NGA2 310 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 WNT8BQ93098 351 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 ZCCHC2Q9C0B9 1178 aaKnown RBP14.41□□□□□ -0.1
TRAF1-201ENST00000373887 TRMT13Q9NUP7 481 aaKnown RBP14.41□□□□□ -0.1
TRAF1-201ENST00000373887 NINJ2Q9NZG7 142 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 A0A087WXM4 84 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 DCLRE1AQ6PJP8 1040 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 TRPV3Q8NET8 790 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 ZNF75CPQ92670 426 aaPredicted RBP14.41□□□□□ -0.1
TRAF1-201ENST00000373887 C1QTNF7Q9BXJ2 289 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 SELPP16109 830 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 GALNT3Q14435 633 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 PLA2G4EQ3MJ16 856 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 WDR93Q6P2C0 686 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 OLFML1Q6UWY5 402 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 NDRG1Q92597 394 aaKnown RBP14.41□□□□□ -0.1
TRAF1-201ENST00000373887 ALG9Q9H6U8 611 aa14.41□□□□□ -0.1
TRAF1-201ENST00000373887 NDRG2Q9UN36 371 aaKnown RBP14.41□□□□□ -0.1
TRAF1-201ENST00000373887 VPS4BO75351 444 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 PSMB4P28070 264 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 POLR2LP62875 67 aaKnown RBP14.4□□□□□ -0.1
TRAF1-201ENST00000373887 MCL1Q07820 350 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 DCTN2Q13561 401 aaKnown RBP14.4□□□□□ -0.1
TRAF1-201ENST00000373887 IL17AQ16552 155 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 ECM1Q16610 540 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 SAMD4BQ5PRF9 694 aaKnown RBP14.4□□□□□ -0.1
TRAF1-201ENST00000373887 FNBP1LQ5T0N5 605 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 ADHFE1Q8IWW8 467 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 DSELQ8IZU8 1212 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 TBCBQ99426 244 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 PCDH12Q9NPG4 1184 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 LRCH1Q9Y2L9 728 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 PCDHA3Q9Y5H8 950 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 CNTNAP1P78357 1384 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 DDX3XO00571 662 aaKnown RBP eCLIP14.4□□□□□ -0.1
TRAF1-201ENST00000373887 SLC9A3R1O14745 358 aaPredicted RBP14.4□□□□□ -0.1
TRAF1-201ENST00000373887 MDM4O15151 490 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 RGS20O76081 388 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 HOXC6P09630 235 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 CSH1P0DML2 217 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 CSH2P0DML3 217 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 UQCRBP14927 111 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 CDK16Q00536 496 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 PFKFB4Q16877 469 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 RGS21Q2M5E4 152 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 CDKAL1Q5VV42 579 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 ZFP1Q6P2D0 407 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 MTMR8Q96EF0 704 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 GPR20Q99678 358 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 CLEC4AQ9UMR7 237 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 PRKAB1Q9Y478 270 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 PRODHO43272 600 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 SEC24AO95486 1093 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 GRIA3P42263 894 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 CEBPGP53567 150 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 ACSM2AQ08AH3 577 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 FRG1Q14331 258 aaKnown RBP14.4□□□□□ -0.1
TRAF1-201ENST00000373887 ACSM2BQ68CK6 577 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 ZNF540Q8NDQ6 660 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 GMPPBQ9Y5P6 360 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 A0A087X1B8 175 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 WWP2O00308 870 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 GMFGO60234 142 aa14.4□□□□□ -0.1
TRAF1-201ENST00000373887 HNF4AP41235 474 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms