RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 ZNF277Q9NRM2 450 aaPredicted RBP5.47□□□□□ -1.53
ATG4A-204ENST00000372246 CACNA2D2Q9NY47 1150 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 HOXC10Q9NYD6 342 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 GPRC5DQ9NZD1 345 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 SLAMF8Q9P0V8 285 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 KLQ9UEF7 1012 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 CPSF3Q9UKF6 684 aaKnown RBP5.47□□□□□ -1.53
ATG4A-204ENST00000372246 SORCS3Q9UPU3 1222 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 CDYLQ9Y232 598 aa5.47□□□□□ -1.53
ATG4A-204ENST00000372246 A0A1B0GTL3 188 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 ZCWPW2A0A1B0GU75 182 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 KRBA1A5PL33 1030 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 VWA5AO00534 786 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 SDHDO14521 159 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 CILPO75339 1184 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 TADA2AO75478 443 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 TSHRP16473 764 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 TCEA1P23193 301 aaKnown RBP5.46□□□□□ -1.53
ATG4A-204ENST00000372246 HOXD10P28358 340 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 GP5P40197 560 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 OPRL1P41146 370 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 NAMPTP43490 491 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 TMED10P49755 219 aaKnown RBP5.46□□□□□ -1.53
ATG4A-204ENST00000372246 SERPINB9P50453 376 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 HMGCS2P54868 508 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 PHEXP78562 749 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 TXNL4AP83876 142 aaKnown RBP5.46□□□□□ -1.53
ATG4A-204ENST00000372246 ECT2LQ008S8 904 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 TAP1Q03518 808 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 SEMA5AQ13591 1074 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 LAMC2Q13753 1193 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 SPIDRQ14159 915 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 TRIM25Q14258 630 aaKnown RBP5.46□□□□□ -1.53
ATG4A-204ENST00000372246 USP10Q14694 798 aaKnown RBP5.46□□□□□ -1.53
ATG4A-204ENST00000372246 POU6F1Q14863 301 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 SPCS2Q15005 226 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 POLD3Q15054 466 aaPredicted RBP5.46□□□□□ -1.53
ATG4A-204ENST00000372246 VPS72Q15906 364 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 IMPG1Q17R60 797 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 XKR3Q5GH77 459 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 FAM47CQ5HY64 1035 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 RABL3Q5HYI8 236 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 HABP4Q5JVS0 413 aaKnown RBP5.46□□□□□ -1.53
ATG4A-204ENST00000372246 TBCELQ5QJ74 424 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 DCLRE1AQ6PJP8 1040 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 SCIMPQ6UWF3 145 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 MAMDC4Q6UXC1 1216 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 OTOP3Q7RTS5 596 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 FAM160B2Q86V87 743 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 CENPLQ8N0S6 344 aaPredicted RBP5.46□□□□□ -1.53
ATG4A-204ENST00000372246 DCBLD1Q8N8Z6 715 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 KDM1BQ8NB78 822 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 MCUQ8NE86 351 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 OR10Q1Q8NGQ4 319 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 RP9Q8TA86 221 aaKnown RBP5.46□□□□□ -1.53
ATG4A-204ENST00000372246 DQX1Q8TE96 717 aaKnown RBP5.46□□□□□ -1.53
ATG4A-204ENST00000372246 ELMO1Q92556 727 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 TFAP2CQ92754 450 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 CDKL2Q92772 493 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 FOXJ1Q92949 421 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 ACDQ96AP0 544 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 FAM149B1Q96BN6 582 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 RTP4Q96DX8 246 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 FEM1CQ96JP0 617 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 CNDP1Q96KN2 507 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 TMEM74Q96NL1 305 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 KCNA7Q96RP8 456 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 RBBP8Q99708 897 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 POMKQ9H5K3 350 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 ZNF385DQ9H6B1 395 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 EFCAB1Q9HAE3 211 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 OXSMQ9NWU1 459 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 NCKIPSDQ9NZQ3 722 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 USP21Q9UK80 565 aa5.46□□□□□ -1.53
ATG4A-204ENST00000372246 ZNF638Q14966 1978 aaKnown RBP5.46□□□□□ -1.54
ATG4A-204ENST00000372246 MGAMO43451 1857 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 CDH23Q9H251 3354 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 A0A0A0MRY4 1105 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 ZBBXA8MT70 800 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 H3BMM5 538 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 NR5A2O00482 541 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 CLDN5O00501 218 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 TRIM38O00635 465 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 OGTO15294 1046 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 NRP2O60462 931 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 E2F6O75461 281 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 GCATO75600 419 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 ALDH1A2O94788 518 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 MT-CYBP00156 380 aaPredicted RBP5.46□□□□□ -1.54
ATG4A-204ENST00000372246 TNNC2P02585 160 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 AHSGP02765 367 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 ALDH2P05091 517 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 INHBBP09529 407 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 SLC35E2BP0CK96 405 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 PGAM1P18669 254 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 CDH3P22223 829 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 LMO2P25791 158 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 PRDX6P30041 224 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 CCND2P30279 289 aa5.46□□□□□ -1.54
ATG4A-204ENST00000372246 SHMT2P34897 504 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms