RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 NAA30Q147X3 362 aaPredicted RBP15.98■□□□□ 0.15
TMEM53-204ENST00000372243 ELF2Q15723 593 aa15.98■□□□□ 0.15
TMEM53-204ENST00000372243 SLC1A5Q15758 541 aa15.98■□□□□ 0.15
TMEM53-204ENST00000372243 ARSIQ5FYB1 569 aa15.98■□□□□ 0.15
TMEM53-204ENST00000372243 ARMC12Q5T9G4 340 aa15.98■□□□□ 0.15
TMEM53-204ENST00000372243 CCNI2Q6ZMN8 369 aaPredicted RBP15.98■□□□□ 0.15
TMEM53-204ENST00000372243 ZNF534Q76KX8 674 aa15.98■□□□□ 0.15
TMEM53-204ENST00000372243 ZCCHC9Q8N567 271 aaKnown RBP15.98■□□□□ 0.15
TMEM53-204ENST00000372243 CLDN23Q96B33 292 aa15.98■□□□□ 0.15
TMEM53-204ENST00000372243 SERPINB12Q96P63 405 aa15.98■□□□□ 0.15
TMEM53-204ENST00000372243 ADGRE3Q9BY15 652 aa15.98■□□□□ 0.15
TMEM53-204ENST00000372243 PARD6BQ9BYG5 372 aa15.98■□□□□ 0.15
TMEM53-204ENST00000372243 TSPYL1Q9H0U9 437 aa15.98■□□□□ 0.15
TMEM53-204ENST00000372243 RSPH9Q9H1X1 276 aaPredicted RBP15.98■□□□□ 0.15
TMEM53-204ENST00000372243 CD248Q9HCU0 757 aa15.98■□□□□ 0.15
TMEM53-204ENST00000372243 DKK3Q9UBP4 350 aa15.98■□□□□ 0.15
TMEM53-204ENST00000372243 MTRF1LQ9UGC7 380 aaKnown RBP15.98■□□□□ 0.15
TMEM53-204ENST00000372243 MTF2Q9Y483 593 aaPredicted RBP15.98■□□□□ 0.15
TMEM53-204ENST00000372243 TRIOO75962 3097 aa15.97■□□□□ 0.15
TMEM53-204ENST00000372243 A0A1W2PQF6 199 aa15.97■□□□□ 0.15
TMEM53-204ENST00000372243 TSPAN11A1L157 253 aa15.97■□□□□ 0.15
TMEM53-204ENST00000372243 DCXO43602 365 aa15.97■□□□□ 0.15
TMEM53-204ENST00000372243 AGTP01019 485 aa15.97■□□□□ 0.15
TMEM53-204ENST00000372243 FGF1P05230 155 aa15.97■□□□□ 0.15
TMEM53-204ENST00000372243 UGT2B4P06133 528 aa15.97■□□□□ 0.15
TMEM53-204ENST00000372243 ATXN1LP0C7T5 689 aaKnown RBP15.97■□□□□ 0.15
TMEM53-204ENST00000372243 GRIA1P42261 906 aa15.97■□□□□ 0.15
TMEM53-204ENST00000372243 MAGEA3P43357 314 aa15.97■□□□□ 0.15
TMEM53-204ENST00000372243 RPS9P46781 194 aaKnown RBP15.97■□□□□ 0.15
TMEM53-204ENST00000372243 VSNL1P62760 191 aa15.97■□□□□ 0.15
TMEM53-204ENST00000372243 SPARCL1Q14515 664 aa15.97■□□□□ 0.15
TMEM53-204ENST00000372243 DENND5AQ6IQ26 1287 aa15.97■□□□□ 0.15
TMEM53-204ENST00000372243 BRAT1Q6PJG6 821 aa15.97■□□□□ 0.15
TMEM53-204ENST00000372243 CAND1Q86VP6 1230 aaKnown RBP15.97■□□□□ 0.15
TMEM53-204ENST00000372243 PJA1Q8NG27 643 aa15.97■□□□□ 0.15
TMEM53-204ENST00000372243 OR2T3Q8NH03 318 aa15.97■□□□□ 0.15
TMEM53-204ENST00000372243 GRIN3AQ8TCU5 1115 aa15.97■□□□□ 0.15
TMEM53-204ENST00000372243 FOXQ1Q9C009 403 aa15.97■□□□□ 0.15
TMEM53-204ENST00000372243 NEUROG2Q9H2A3 272 aa15.97■□□□□ 0.15
TMEM53-204ENST00000372243 NFU1Q9UMS0 254 aa15.97■□□□□ 0.15
TMEM53-204ENST00000372243 CHKBQ9Y259 395 aa15.97■□□□□ 0.15
TMEM53-204ENST00000372243 PCDHB9Q9Y5E1 797 aa15.97■□□□□ 0.15
TMEM53-204ENST00000372243 ANKRD66B4E2M5 251 aa15.96■□□□□ 0.15
TMEM53-204ENST00000372243 C1QTNF3-AMACRE9PGA6 284 aa15.96■□□□□ 0.15
TMEM53-204ENST00000372243 RNASEH1O60930 286 aaKnown RBP15.96■□□□□ 0.15
TMEM53-204ENST00000372243 USP12O75317 370 aa15.96■□□□□ 0.15
TMEM53-204ENST00000372243 PDHA1P08559 390 aa15.96■□□□□ 0.15
TMEM53-204ENST00000372243 ALADP13716 330 aa15.96■□□□□ 0.15
TMEM53-204ENST00000372243 GRIA4P48058 902 aa15.96■□□□□ 0.15
TMEM53-204ENST00000372243 POLR2LP62875 67 aaKnown RBP15.96■□□□□ 0.15
TMEM53-204ENST00000372243 HIF1AQ16665 826 aa15.96■□□□□ 0.15
TMEM53-204ENST00000372243 ZNF805Q5CZA5 627 aa15.96■□□□□ 0.15
TMEM53-204ENST00000372243 FAM46CQ5VWP2 391 aa15.96■□□□□ 0.15
TMEM53-204ENST00000372243 ARMC3Q5W041 872 aa15.96■□□□□ 0.15
TMEM53-204ENST00000372243 CEP128Q6ZU80 1094 aa15.96■□□□□ 0.15
TMEM53-204ENST00000372243 SYT13Q7L8C5 426 aa15.96■□□□□ 0.15
TMEM53-204ENST00000372243 PDIK1LQ8N165 341 aa15.96■□□□□ 0.15
TMEM53-204ENST00000372243 OR52K1Q8NGK4 314 aa15.96■□□□□ 0.15
TMEM53-204ENST00000372243 PIP4K2CQ8TBX8 421 aa15.96■□□□□ 0.15
TMEM53-204ENST00000372243 PPP1R16AQ96I34 528 aa15.96■□□□□ 0.15
TMEM53-204ENST00000372243 KLHL32Q96NJ5 620 aa15.96■□□□□ 0.15
TMEM53-204ENST00000372243 FMO2Q99518 471 aa15.96■□□□□ 0.15
TMEM53-204ENST00000372243 PPIL1Q9Y3C6 166 aa15.96■□□□□ 0.15
TMEM53-204ENST00000372243 ATG2BQ96BY7 2078 aa15.96■□□□□ 0.15
TMEM53-204ENST00000372243 E7ESA3 106 aa15.96■□□□□ 0.14
TMEM53-204ENST00000372243 GOLGA8MH3BSY2 632 aa15.96■□□□□ 0.14
TMEM53-204ENST00000372243 EIF3HO15372 352 aaKnown RBP eCLIP15.96■□□□□ 0.14
TMEM53-204ENST00000372243 NPY2RP49146 381 aa15.96■□□□□ 0.14
TMEM53-204ENST00000372243 COPAP53621 1224 aa15.96■□□□□ 0.14
TMEM53-204ENST00000372243 ARL4CP56559 192 aa15.96■□□□□ 0.14
TMEM53-204ENST00000372243 SATB1Q01826 763 aa15.96■□□□□ 0.14
TMEM53-204ENST00000372243 OLIG2Q13516 323 aa15.96■□□□□ 0.14
TMEM53-204ENST00000372243 CRY1Q16526 586 aa15.96■□□□□ 0.14
TMEM53-204ENST00000372243 SIRPB2Q5JXA9 342 aa15.96■□□□□ 0.14
TMEM53-204ENST00000372243 CFAP58Q5T655 872 aa15.96■□□□□ 0.14
TMEM53-204ENST00000372243 KIAA1211LQ6NV74 962 aa15.96■□□□□ 0.14
TMEM53-204ENST00000372243 Q6ZS52 159 aa15.96■□□□□ 0.14
TMEM53-204ENST00000372243 KDELC2Q7Z4H8 507 aa15.96■□□□□ 0.14
TMEM53-204ENST00000372243 NDUFAF2Q8N183 169 aa15.96■□□□□ 0.14
TMEM53-204ENST00000372243 DNAAF3Q8N9W5 541 aa15.96■□□□□ 0.14
TMEM53-204ENST00000372243 PDCD6IPQ8WUM4 868 aaKnown RBP15.96■□□□□ 0.14
TMEM53-204ENST00000372243 PIH1D2Q8WWB5 315 aa15.96■□□□□ 0.14
TMEM53-204ENST00000372243 APOL2Q9BQE5 337 aa15.96■□□□□ 0.14
TMEM53-204ENST00000372243 IER2Q9BTL4 223 aa15.96■□□□□ 0.14
TMEM53-204ENST00000372243 SARDHQ9UL12 918 aa15.96■□□□□ 0.14
TMEM53-204ENST00000372243 PHTF1Q9UMS5 762 aa15.96■□□□□ 0.14
TMEM53-204ENST00000372243 ADH1BP00325 375 aa15.95■□□□□ 0.14
TMEM53-204ENST00000372243 CPP00450 1065 aa15.95■□□□□ 0.14
TMEM53-204ENST00000372243 IL1BP01584 269 aa15.95■□□□□ 0.14
TMEM53-204ENST00000372243 MYBL2P10244 700 aa15.95■□□□□ 0.14
TMEM53-204ENST00000372243 COL9A1P20849 921 aa15.95■□□□□ 0.14
TMEM53-204ENST00000372243 ITGB7P26010 798 aa15.95■□□□□ 0.14
TMEM53-204ENST00000372243 MAGEA9P43362 315 aa15.95■□□□□ 0.14
TMEM53-204ENST00000372243 CHRNA4P43681 627 aa15.95■□□□□ 0.14
TMEM53-204ENST00000372243 ZBTB16Q05516 673 aa15.95■□□□□ 0.14
TMEM53-204ENST00000372243 MSLNQ13421 630 aaPredicted RBP15.95■□□□□ 0.14
TMEM53-204ENST00000372243 ZNF776Q68DI1 518 aaPredicted RBP15.95■□□□□ 0.14
TMEM53-204ENST00000372243 PKN3Q6P5Z2 889 aa15.95■□□□□ 0.14
TMEM53-204ENST00000372243 TRIM67Q6ZTA4 783 aa15.95■□□□□ 0.14
TMEM53-204ENST00000372243 CENPUQ71F23 418 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms