RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 RBM44Q6ZP01 1051 aaKnown RBP11.59□□□□□ -0.55
TSPAN1-201ENST00000372003 ZCCHC23Q6ZST2 131 aa11.59□□□□□ -0.55
TSPAN1-201ENST00000372003 FRMD7Q6ZUT3 714 aa11.59□□□□□ -0.55
TSPAN1-201ENST00000372003 HPS6Q86YV9 775 aa11.59□□□□□ -0.55
TSPAN1-201ENST00000372003 TCEAL8Q8IYN2 117 aa11.59□□□□□ -0.55
TSPAN1-201ENST00000372003 CPSF7Q8N684 471 aaKnown RBP11.59□□□□□ -0.55
TSPAN1-201ENST00000372003 GPR152Q8TDT2 470 aa11.59□□□□□ -0.55
TSPAN1-201ENST00000372003 GIPC2Q8TF65 315 aa11.59□□□□□ -0.55
TSPAN1-201ENST00000372003 C2orf15Q8WU43 125 aaKnown RBP11.59□□□□□ -0.55
TSPAN1-201ENST00000372003 RXFP2Q8WXD0 754 aa11.59□□□□□ -0.55
TSPAN1-201ENST00000372003 NMD3Q96D46 503 aaKnown RBP11.59□□□□□ -0.55
TSPAN1-201ENST00000372003 OCEL1Q9H607 264 aa11.59□□□□□ -0.55
TSPAN1-201ENST00000372003 PCDH18Q9HCL0 1135 aa11.59□□□□□ -0.55
TSPAN1-201ENST00000372003 MRPL40Q9NQ50 206 aaKnown RBP11.59□□□□□ -0.55
TSPAN1-201ENST00000372003 HSFX1Q9UBD0 423 aa11.59□□□□□ -0.55
TSPAN1-201ENST00000372003 MYO7AQ13402 2215 aa11.59□□□□□ -0.55
TSPAN1-201ENST00000372003 PRRC2BQ5JSZ5 2229 aaKnown RBP11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 GOLGA8QA0A0J9YX86 632 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 RGSL1A5PLK6 1076 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 GOLGA8OA6NCC3 632 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 GOLGA8NF8WBI6 632 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 SLCO1B7G3V0H7 640 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 TPP1O14773 563 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 LYPLA1O75608 230 aaPredicted RBP11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 CRTAMO95727 393 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 ALDOAP04075 364 aaKnown RBP11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 HAPLN1P10915 354 aaPredicted RBP11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 PDGFRAP16234 1089 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 PGAM1P18669 254 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 RAB15P59190 212 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 USP46P62068 366 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 LRRC36Q1X8D7 754 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 NADK2Q4G0N4 442 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 PAQR9Q6ZVX9 377 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 FAM35AQ86V20 835 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 CROCCP3Q8IVE0 287 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 POU5F2Q8N7G0 328 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 HLA-CQ95604 372 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 QKIQ96PU8 341 aaKnown RBP eCLIP11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 GCNAQ96QF7 691 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 PREBQ9HCU5 417 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 PRDM6Q9NQX0 595 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 DZANK1Q9NVP4 752 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 DNAAF2Q9NVR5 837 aaKnown RBP11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 PNPOQ9NVS9 261 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 TJP2Q9UDY2 1190 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 YIPF1Q9Y548 306 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 INSL5Q9Y5Q6 135 aa11.58□□□□□ -0.56
TSPAN1-201ENST00000372003 CAPN8A6NHC0 703 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 C1RP00736 705 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 PRKCGP05129 697 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 MPOP05164 745 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 APOA4P06727 396 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 NCF2P19878 526 aaPredicted RBP11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 GP5P40197 560 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 MAGEA8P43361 318 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 SERPINB8P50452 374 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 NRLP54845 237 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 DCTN2Q13561 401 aaKnown RBP11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 DPYSQ14117 519 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 IRAK1BP1Q5VVH5 260 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 SYCE2Q6PIF2 218 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 BNC2Q6ZN30 1099 aaPredicted RBP11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 ZDHHC17Q8IUH5 632 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 C10orf107Q8IVU9 208 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 PGAM4Q8N0Y7 254 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 NUP93Q8N1F7 819 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 KYQ8NBH2 561 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 PCDH19Q8TAB3 1148 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 UBA3Q8TBC4 463 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 RDH11Q8TC12 318 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 FUBP3Q96I24 572 aaKnown RBP eCLIP11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 HNRNPABQ99729 332 aaKnown RBP11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 CPNE1Q99829 537 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 SLC2A11Q9BYW1 496 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 UBE2ZQ9H832 354 aaPredicted RBP11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 SFXN1Q9H9B4 322 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 TBCCD1Q9NVR7 557 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 RIMS3Q9UJD0 308 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 TSPAN16Q9UKR8 245 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 MAFFQ9ULX9 164 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 AP4B1Q9Y6B7 739 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 PRSS51A0A1B0GVH4 220 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 M0QYV0 167 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 BEST1O76090 585 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 OR6B1O95007 311 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 METTL18O95568 372 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 HOXB8P17481 243 aaPredicted RBP11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 ATF6P18850 670 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 EPHB3P54753 998 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 MAP3K7CLP57077 242 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 SFSWAPQ12872 951 aaKnown RBP11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 COL19A1Q14993 1142 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 TAF12Q16514 161 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 DPYSL2Q16555 572 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 GOLGA7BQ2TAP0 167 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 PIGGQ5H8A4 983 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 SPANXN3Q5MJ09 141 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 LCLAT1Q6UWP7 414 aa11.57□□□□□ -0.56
TSPAN1-201ENST00000372003 ERI1Q8IV48 349 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms