RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 CFAP36Q96G28 342 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 DDX23Q9BUQ8 820 aaKnown RBP7.11□□□□□ -1.27
USP1-202ENST00000371146 C1QTNF1Q9BXJ1 281 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 IL1RAPL1Q9NZN1 696 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 DKK3Q9UBP4 350 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 SALL4Q9UJQ4 1053 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 SNX24Q9Y343 169 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 HBS1LQ9Y450 684 aaKnown RBP7.11□□□□□ -1.27
USP1-202ENST00000371146 SPTBN5Q9NRC6 3674 aaKnown RBP7.11□□□□□ -1.27
USP1-202ENST00000371146 TMEM191CA6NGB0 347 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 A8MU76 341 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 TTI1O43156 1089 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 MFSD11O43934 449 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 ATG13O75143 517 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 TJP3O95049 919 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 OAS1P00973 400 aaKnown RBP7.11□□□□□ -1.27
USP1-202ENST00000371146 FYNP06241 537 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 GZMAP12544 262 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 ITPKAP23677 461 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 PRAMEP78395 509 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 C2orf54Q08AI8 447 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 APTXQ7Z2E3 356 aaKnown RBP7.11□□□□□ -1.27
USP1-202ENST00000371146 KRT77Q7Z794 578 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 SLC15A3Q8IY34 581 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 CXorf40AQ8TE69 158 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 ACDQ96AP0 544 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 SPATA17Q96L03 361 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 FEM1AQ9BSK4 669 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 FICDQ9BVA6 458 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 KLF16Q9BXK1 252 aaPredicted RBP7.11□□□□□ -1.27
USP1-202ENST00000371146 VRTNQ9H8Y1 702 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 ANLNQ9NQW6 1124 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 SAMD15Q9P1V8 674 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 PSMD13Q9UNM6 376 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 FLNBO75369 2602 aaKnown RBP7.11□□□□□ -1.27
USP1-202ENST00000371146 CKAP5Q14008 2032 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 FSCN2O14926 492 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 STX7O15400 261 aaKnown RBP7.11□□□□□ -1.27
USP1-202ENST00000371146 DNAJC6O75061 913 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 TMCC1O94876 653 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 TMEM253P0C7T8 217 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 DHX9Q08211 1270 aaKnown RBP7.11□□□□□ -1.27
USP1-202ENST00000371146 CALCOCO2Q13137 446 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 EOGTQ5NDL2 527 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 HGSNATQ68CP4 663 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 C16orf46Q6P387 395 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 NCEH1Q6PIU2 408 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 CYP2U1Q7Z449 544 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 TRAPPC5Q8IUR0 188 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 PDCD7Q8N8D1 485 aaKnown RBP7.11□□□□□ -1.27
USP1-202ENST00000371146 MDGA1Q8NFP4 955 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 NAPGQ99747 312 aaPredicted RBP7.11□□□□□ -1.27
USP1-202ENST00000371146 SPATA16Q9BXB7 569 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 VPS37BQ9H9H4 285 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 UVRAGQ9P2Y5 699 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 DAAM1Q9Y4D1 1078 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 CFAP20Q9Y6A4 193 aaKnown RBP7.11□□□□□ -1.27
USP1-202ENST00000371146 SPEGQ15772 3267 aa7.11□□□□□ -1.27
USP1-202ENST00000371146 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.1□□□□□ -1.27
USP1-202ENST00000371146 H0Y8X5 98 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 INSIG1O15503 277 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 SYF2O95926 243 aaKnown RBP7.1□□□□□ -1.27
USP1-202ENST00000371146 SERPINF2P08697 491 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 ELFN1P0C7U0 828 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 MYBL1P10243 752 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 UNGP13051 313 aaPredicted RBP7.1□□□□□ -1.27
USP1-202ENST00000371146 PPP3CCP48454 512 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 PLTPP55058 493 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 IRX4P78413 519 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 SUZ12Q15022 739 aaKnown RBP7.1□□□□□ -1.27
USP1-202ENST00000371146 NADSYN1Q6IA69 706 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 TRNP1Q6NT89 227 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 MON1BQ7L1V2 547 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 CHST15Q7LFX5 561 aaPredicted RBP7.1□□□□□ -1.27
USP1-202ENST00000371146 RALGPS2Q86X27 583 aaPredicted RBP7.1□□□□□ -1.27
USP1-202ENST00000371146 ANKMY2Q8IV38 441 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 NDUFAF2Q8N183 169 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 MCUQ8NE86 351 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 OR52K2Q8NGK3 314 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 EDAQ92838 391 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 SCAMP4Q969E2 229 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 PLD4Q96BZ4 506 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 CSPG4P5Q96PW8 444 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 PEBP4Q96S96 227 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 NELL2Q99435 816 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 CARD6Q9BX69 1037 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 ZNF304Q9HCX3 659 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 CYLDQ9NQC7 956 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 AMACRQ9UHK6 382 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 PRELID1Q9Y255 219 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 TARSL2A2RTX5 802 aaKnown RBP7.1□□□□□ -1.27
USP1-202ENST00000371146 SASH3O75995 380 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 HEXIM1O94992 359 aaKnown RBP7.1□□□□□ -1.27
USP1-202ENST00000371146 CCNB1P14635 433 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 CCNCP24863 283 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 MPSTP25325 297 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 CLDN10P78369 228 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 CRY1Q16526 586 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 CEP85LQ5SZL2 805 aa7.1□□□□□ -1.27
USP1-202ENST00000371146 ZNF648Q5T619 568 aaPredicted RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms