RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 CST1P01037 141 aa18.27■□□□□ 0.52
SNX27-202ENST00000368841 CYP1A1P04798 512 aaPredicted RBP18.27■□□□□ 0.52
SNX27-202ENST00000368841 RNF19BQ6ZMZ0 732 aa18.27■□□□□ 0.52
SNX27-202ENST00000368841 CNOT6Q9ULM6 557 aaKnown RBP18.27■□□□□ 0.52
SNX27-202ENST00000368841 ZMYND8Q9ULU4 1186 aaPredicted RBP18.27■□□□□ 0.52
SNX27-202ENST00000368841 BTN3A3O00478 584 aa18.27■□□□□ 0.52
SNX27-202ENST00000368841 ANXA6P08133 673 aa18.27■□□□□ 0.52
SNX27-202ENST00000368841 UQCRBP14927 111 aa18.27■□□□□ 0.52
SNX27-202ENST00000368841 GLRA2P23416 452 aa18.27■□□□□ 0.52
SNX27-202ENST00000368841 PSMD8P48556 350 aa18.27■□□□□ 0.52
SNX27-202ENST00000368841 MPPE1Q53F39 396 aa18.27■□□□□ 0.52
SNX27-202ENST00000368841 TTMPQ5BVD1 217 aa18.27■□□□□ 0.52
SNX27-202ENST00000368841 ZNF549Q6P9A3 640 aa18.27■□□□□ 0.52
SNX27-202ENST00000368841 PEG10Q86TG7 708 aaKnown RBP18.27■□□□□ 0.52
SNX27-202ENST00000368841 SETD9Q8NE22 299 aa18.27■□□□□ 0.52
SNX27-202ENST00000368841 NPAS2Q99743 824 aa18.27■□□□□ 0.52
SNX27-202ENST00000368841 ATP13A3Q9H7F0 1226 aa18.27■□□□□ 0.52
SNX27-202ENST00000368841 NAGLUP54802 743 aa18.27■□□□□ 0.51
SNX27-202ENST00000368841 CDKAL1Q5VV42 579 aa18.27■□□□□ 0.51
SNX27-202ENST00000368841 TINF2Q9BSI4 451 aa18.27■□□□□ 0.51
SNX27-202ENST00000368841 CDADC1Q9BWV3 514 aa18.27■□□□□ 0.51
SNX27-202ENST00000368841 KPNA4O00629 521 aaPredicted RBP18.27■□□□□ 0.51
SNX27-202ENST00000368841 MARCKSL1P49006 195 aa18.27■□□□□ 0.51
SNX27-202ENST00000368841 ZCCHC9Q8N567 271 aaKnown RBP18.27■□□□□ 0.51
SNX27-202ENST00000368841 PSMA8Q8TAA3 256 aa18.27■□□□□ 0.51
SNX27-202ENST00000368841 ZYG11BQ9C0D3 744 aa18.27■□□□□ 0.51
SNX27-202ENST00000368841 ETNPPLQ8TBG4 499 aa18.26■□□□□ 0.51
SNX27-202ENST00000368841 EEF1AKMT1Q8WVE0 214 aa18.26■□□□□ 0.51
SNX27-202ENST00000368841 UMODL1Q5DID0 1318 aa18.26■□□□□ 0.51
SNX27-202ENST00000368841 BRCC3P46736 316 aa18.26■□□□□ 0.51
SNX27-202ENST00000368841 GRIK5Q16478 980 aa18.26■□□□□ 0.51
SNX27-202ENST00000368841 AXIN1O15169 862 aa18.26■□□□□ 0.51
SNX27-202ENST00000368841 NOMO2Q5JPE7 1267 aa18.26■□□□□ 0.51
SNX27-202ENST00000368841 CCSAPQ6IQ19 270 aaPredicted RBP18.26■□□□□ 0.51
SNX27-202ENST00000368841 ASF1AQ9Y294 204 aa18.26■□□□□ 0.51
SNX27-202ENST00000368841 ERN1O75460 977 aaKnown RBP18.26■□□□□ 0.51
SNX27-202ENST00000368841 SLC25A14O95258 325 aaPredicted RBP18.26■□□□□ 0.51
SNX27-202ENST00000368841 CXCL14O95715 111 aa18.26■□□□□ 0.51
SNX27-202ENST00000368841 TFPIP10646 304 aa18.26■□□□□ 0.51
SNX27-202ENST00000368841 RCVRNP35243 200 aa18.26■□□□□ 0.51
SNX27-202ENST00000368841 OMPP47874 163 aa18.26■□□□□ 0.51
SNX27-202ENST00000368841 CLK3P49761 638 aaKnown RBP18.26■□□□□ 0.51
SNX27-202ENST00000368841 CEBPGP53567 150 aa18.26■□□□□ 0.51
SNX27-202ENST00000368841 RGS1Q08116 209 aa18.26■□□□□ 0.51
SNX27-202ENST00000368841 PTPRNQ16849 979 aa18.26■□□□□ 0.51
SNX27-202ENST00000368841 INO80DQ53TQ3 878 aaPredicted RBP18.26■□□□□ 0.51
SNX27-202ENST00000368841 PGM3O95394 542 aa18.26■□□□□ 0.51
SNX27-202ENST00000368841 NOS2P35228 1153 aa18.26■□□□□ 0.51
SNX27-202ENST00000368841 ELOA2Q8IYF1 753 aaPredicted RBP18.26■□□□□ 0.51
SNX27-202ENST00000368841 FNDC11Q9BVV2 318 aa18.26■□□□□ 0.51
SNX27-202ENST00000368841 ABCG4Q9H172 646 aa18.26■□□□□ 0.51
SNX27-202ENST00000368841 TRIM39Q9HCM9 518 aa18.26■□□□□ 0.51
SNX27-202ENST00000368841 ZNF780BQ9Y6R6 833 aa18.26■□□□□ 0.51
SNX27-202ENST00000368841 SGTAO43765 313 aa18.26■□□□□ 0.51
SNX27-202ENST00000368841 HGFP14210 728 aa18.26■□□□□ 0.51
SNX27-202ENST00000368841 AFTPHQ6ULP2 937 aa18.26■□□□□ 0.51
SNX27-202ENST00000368841 ZC3H13Q5T200 1668 aaKnown RBP18.26■□□□□ 0.51
SNX27-202ENST00000368841 USP31Q70CQ4 1352 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 PEX10O60683 326 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 PSMG1O95456 288 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 AXLP30530 894 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 GALNTL5Q7Z4T8 443 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 ING5Q8WYH8 240 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 AARSD1Q9BTE6 412 aaKnown RBP18.25■□□□□ 0.51
SNX27-202ENST00000368841 SF3B1O75533 1304 aaKnown RBP eCLIP18.25■□□□□ 0.512e-6■■■■■ 69.7
SNX27-202ENST00000368841 FAM92AA1XBS5 289 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 OPLAHO14841 1288 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 GUCY1B2O75343 617 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 CDC42P60953 191 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 CAMK1Q14012 370 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 SAMD4BQ5PRF9 694 aaKnown RBP18.25■□□□□ 0.51
SNX27-202ENST00000368841 ADHFE1Q8IWW8 467 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 ATL1Q8WXF7 558 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 RAB23Q9ULC3 237 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 A0A1W2PQH9 124 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 PAEPP09466 180 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 FOSL2P15408 326 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 EPHA3P29320 983 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 TMEM199Q8N511 208 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 PHF10Q8WUB8 498 aaKnown RBP18.25■□□□□ 0.51
SNX27-202ENST00000368841 BRINP2Q9C0B6 783 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 GDF3Q9NR23 364 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 GPC6Q9Y625 555 aaPredicted RBP18.25■□□□□ 0.51
SNX27-202ENST00000368841 H3BMM5 538 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 APOC4-APOC2K7ER74 178 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 APOC2P02655 101 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 PRLRP16471 622 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 LENG9Q96B70 501 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 FAM155BO75949 473 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 MED22Q15528 200 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 NTRK3Q16288 839 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 STAG3L4Q8TBR4 150 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 IL22Q9GZX6 179 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 PPP2R3BQ9Y5P8 575 aa18.25■□□□□ 0.51
SNX27-202ENST00000368841 A0A075B6Q4 140 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 COX4I1P13073 169 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 RPL9P32969 192 aaKnown RBP18.24■□□□□ 0.51
SNX27-202ENST00000368841 KAZALD1Q96I82 304 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 IKZF4Q9H2S9 585 aa18.24■□□□□ 0.51
SNX27-202ENST00000368841 L1RE1Q9UN81 338 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms