RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 SPOCK2Q92563 424 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 PTPRN2Q92932 1015 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 RMDN1Q96DB5 314 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 PKNOX2Q96KN3 472 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 SRPK1Q96SB4 655 aaKnown RBP12.41□□□□□ -0.42
TUBE1-202ENST00000368662 FUT8Q9BYC5 575 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 ACBD3Q9H3P7 528 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 ZDHHC6Q9H6R6 413 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 SYBUQ9NX95 663 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 DUSP12Q9UNI6 340 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 CHKBQ9Y259 395 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 COL4A2P08572 1712 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 HEATR9A2RTY3 570 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 ANKRD66B4E2M5 251 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 PGLSO95336 258 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 ACSL3O95573 720 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 NUDT17P0C025 328 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 ADRA1DP25100 572 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 GRIA4P48058 902 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 EPHB1P54762 984 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 EIF3BP55884 814 aaKnown RBP12.41□□□□□ -0.42
TUBE1-202ENST00000368662 ZP2Q05996 745 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 SLC29A2Q14542 456 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 UAP1Q16222 522 aaPredicted RBP12.41□□□□□ -0.42
TUBE1-202ENST00000368662 HP1BP3Q5SSJ5 553 aaPredicted RBP12.41□□□□□ -0.42
TUBE1-202ENST00000368662 CERCAMQ5T4B2 595 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 TXNDC11Q6PKC3 985 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 C3orf62Q6ZUJ4 267 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 NLRP9Q7RTR0 991 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 CAMK1DQ8IU85 385 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 AGGF1Q8N302 714 aaeCLIP12.41□□□□□ -0.42
TUBE1-202ENST00000368662 PAF1Q8N7H5 531 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 ZNF513Q8N8E2 541 aaPredicted RBP12.41□□□□□ -0.42
TUBE1-202ENST00000368662 NSMCE3Q96MG7 304 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 RANBP9Q96S59 729 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 WDR83Q9BRX9 315 aaKnown RBP12.41□□□□□ -0.42
TUBE1-202ENST00000368662 SUV39H2Q9H5I1 410 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 MRM3Q9HC36 420 aaKnown RBP12.41□□□□□ -0.42
TUBE1-202ENST00000368662 FBRSL1Q9HCM7 1045 aaKnown RBP12.41□□□□□ -0.42
TUBE1-202ENST00000368662 IL36AQ9UHA7 158 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 PCDHB9Q9Y5E1 797 aa12.41□□□□□ -0.42
TUBE1-202ENST00000368662 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.41□□□□□ -0.42
TUBE1-202ENST00000368662 A0A087WUV0 522 aaPredicted RBP12.4□□□□□ -0.42
TUBE1-202ENST00000368662 FAM237BA0A1B0GVD1 139 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 K7EQS6 105 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 MAN2B1O00754 1011 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 MAP2K7O14733 419 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 NARSO43776 548 aaKnown RBP12.4□□□□□ -0.42
TUBE1-202ENST00000368662 PRLP01236 227 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 PRNPP04156 253 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 TPH1P17752 444 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 NFKBIAP25963 317 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 CHRNA4P43681 627 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 POLR2LP62875 67 aaKnown RBP12.4□□□□□ -0.42
TUBE1-202ENST00000368662 ENPP2Q13822 863 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 GALNT3Q14435 633 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 ELAVL3Q14576 367 aaKnown RBP12.4□□□□□ -0.42
TUBE1-202ENST00000368662 FBXO43Q4G163 708 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 SLC44A4Q53GD3 710 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 TRMT11Q7Z4G4 463 aaKnown RBP12.4□□□□□ -0.42
TUBE1-202ENST00000368662 MPP5Q8N3R9 675 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 LPCAT1Q8NF37 534 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 HCAR2Q8TDS4 363 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 OR8D1Q8WZ84 308 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 ECHDC3Q96DC8 303 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 RUFY1Q96T51 708 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 CCDC77Q9BR77 488 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 KIFC1Q9BW19 673 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 VPS37BQ9H9H4 285 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 PRDM6Q9NQX0 595 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 ZNF446Q9NWS9 450 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 HACD3Q9P035 362 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 SOX13Q9UN79 622 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 SORCS3Q9UPU3 1222 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 MYO10Q9HD67 2058 aa12.4□□□□□ -0.42
TUBE1-202ENST00000368662 USP1O94782 785 aa12.4□□□□□ -0.43
TUBE1-202ENST00000368662 PIGNO95427 931 aa12.4□□□□□ -0.43
TUBE1-202ENST00000368662 STX2P32856 288 aa12.4□□□□□ -0.43
TUBE1-202ENST00000368662 IL12RB1P42701 662 aa12.4□□□□□ -0.43
TUBE1-202ENST00000368662 KIR2DL1P43626 348 aaPredicted RBP12.4□□□□□ -0.43
TUBE1-202ENST00000368662 POU6F1Q14863 301 aa12.4□□□□□ -0.43
TUBE1-202ENST00000368662 PON2Q15165 354 aa12.4□□□□□ -0.43
TUBE1-202ENST00000368662 EGFLAMQ63HQ2 1017 aa12.4□□□□□ -0.43
TUBE1-202ENST00000368662 STEAP4Q687X5 459 aa12.4□□□□□ -0.43
TUBE1-202ENST00000368662 SDE2Q6IQ49 451 aa12.4□□□□□ -0.43
TUBE1-202ENST00000368662 BRAT1Q6PJG6 821 aa12.4□□□□□ -0.43
TUBE1-202ENST00000368662 LRIG3Q6UXM1 1119 aa12.4□□□□□ -0.43
TUBE1-202ENST00000368662 GDPD4Q6W3E5 623 aa12.4□□□□□ -0.43
TUBE1-202ENST00000368662 CYS1Q717R9 158 aa12.4□□□□□ -0.43
TUBE1-202ENST00000368662 DSG4Q86SJ6 1040 aa12.4□□□□□ -0.43
TUBE1-202ENST00000368662 TMEM135Q86UB9 458 aa12.4□□□□□ -0.43
TUBE1-202ENST00000368662 IGDCC3Q8IVU1 814 aa12.4□□□□□ -0.43
TUBE1-202ENST00000368662 SFTPA1Q8IWL2 248 aa12.4□□□□□ -0.43
TUBE1-202ENST00000368662 CHPFQ8IZ52 775 aa12.4□□□□□ -0.43
TUBE1-202ENST00000368662 IQCKQ8N0W5 287 aa12.4□□□□□ -0.43
TUBE1-202ENST00000368662 GSDMBQ8TAX9 411 aa12.4□□□□□ -0.43
TUBE1-202ENST00000368662 BRSK1Q8TDC3 778 aa12.4□□□□□ -0.43
TUBE1-202ENST00000368662 PEX13Q92968 403 aa12.4□□□□□ -0.43
TUBE1-202ENST00000368662 EPB41L4BQ9H329 900 aa12.4□□□□□ -0.43
TUBE1-202ENST00000368662 WASF2Q9Y6W5 498 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms