RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 ARMCX1Q9P291 453 aa14.13□□□□□ -0.15
USF1-202ENST00000368020 SLC27A5Q9Y2P5 690 aa14.13□□□□□ -0.15
USF1-202ENST00000368020 LOC285095A0A1B0GVY8 99 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 MROH6A6NGR9 719 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 B2RBV5 119 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 F8W8V4 182 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 GOLGA8TH3BQL2 631 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 J3KR12 359 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 CIB2O75838 187 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 CNTN5O94779 1100 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 EFEMP2O95967 443 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 PGM1P36871 562 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 ETFBP38117 255 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 PPP3CCP48454 512 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 CDH4P55283 916 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 TUBB3Q13509 450 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 E2F5Q15329 346 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 DLG2Q15700 870 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 SMAD1Q15797 465 aaKnown RBP14.12□□□□□ -0.15
USF1-202ENST00000368020 AGAP9Q5VTM2 703 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 RINLQ6ZS11 566 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 ELMO2Q96JJ3 720 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 NACA2Q9H009 215 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 ZNF358Q9NW07 568 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 STK39Q9UEW8 545 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 RUVBL2Q9Y230 463 aaKnown RBP14.12□□□□□ -0.15
USF1-202ENST00000368020 C15orf41Q9Y2V0 281 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 GOLGA8QA0A0J9YX86 632 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 GOLGA8OA6NCC3 632 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 GOLGA8NF8WBI6 632 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 ACSL4O60488 711 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 NPHS1O60500 1241 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 PEX11AO75192 247 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 ANP32DO95626 131 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 TBX18O95935 607 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 MMP2P08253 660 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 SERPINF2P08697 491 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 GABRB3P28472 473 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 ADSLP30566 484 aaPredicted RBP14.12□□□□□ -0.15
USF1-202ENST00000368020 PPM1AP35813 382 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 DNAJB13P59910 316 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 PRAMEP78395 509 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 CTBP1Q13363 440 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 TRMT5Q32P41 509 aaKnown RBP14.12□□□□□ -0.15
USF1-202ENST00000368020 TPGS2Q68CL5 300 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 EPGNQ6UW88 154 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 PIWIL4Q7Z3Z4 852 aaKnown RBP14.12□□□□□ -0.15
USF1-202ENST00000368020 SLC41A1Q8IVJ1 513 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 DENND6AQ8IWF6 608 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 CENPLQ8N0S6 344 aaPredicted RBP14.12□□□□□ -0.15
USF1-202ENST00000368020 AFAP1L2Q8N4X5 818 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 FIBCD1Q8N539 461 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 TDRD5Q8NAT2 981 aaKnown RBP14.12□□□□□ -0.15
USF1-202ENST00000368020 GPR152Q8TDT2 470 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 STMN2Q93045 179 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 IGSF21Q96ID5 467 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 RSRC1Q96IZ7 334 aaKnown RBP14.12□□□□□ -0.15
USF1-202ENST00000368020 ZNF558Q96NG5 402 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 EBF4Q9BQW3 602 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 DENND2DQ9H6A0 471 aaPredicted RBP14.12□□□□□ -0.15
USF1-202ENST00000368020 NCKIPSDQ9NZQ3 722 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 HCSTQ9UBK5 93 aa14.12□□□□□ -0.15
USF1-202ENST00000368020 UXTQ9UBK9 157 aaPredicted RBP14.12□□□□□ -0.15
USF1-202ENST00000368020 AFF4Q9UHB7 1163 aaKnown RBP14.12□□□□□ -0.15
USF1-202ENST00000368020 MRPL42Q9Y6G3 142 aaKnown RBP14.12□□□□□ -0.15
USF1-202ENST00000368020 ZNF195O14628 629 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 HDAC3O15379 428 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 PHGDHO43175 533 aaKnown RBP14.11□□□□□ -0.15
USF1-202ENST00000368020 TLL1O43897 1013 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 DIAPH2O60879 1101 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 CLDN11O75508 207 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 VNN2O95498 520 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 RBP1P09455 135 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 ATF6P18850 670 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 RPL14P50914 215 aaKnown RBP14.11□□□□□ -0.15
USF1-202ENST00000368020 COPAP53621 1224 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 MXRA7P84157 204 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 MPP1Q00013 466 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 DSC2Q02487 901 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 ACVR1Q04771 509 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 SHHQ15465 462 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 C9orf50Q5SZB4 431 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 HECTD3Q5T447 861 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 SEL1L3Q68CR1 1132 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 CHST9Q7L1S5 443 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 NET1Q7Z628 596 aaPredicted RBP14.11□□□□□ -0.15
USF1-202ENST00000368020 TREML1Q86YW5 311 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 RNF168Q8IYW5 571 aaPredicted RBP14.11□□□□□ -0.15
USF1-202ENST00000368020 LGI2Q8N0V4 545 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 SLC39A11Q8N1S5 342 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 FSTL5Q8N475 847 aaPredicted RBP14.11□□□□□ -0.15
USF1-202ENST00000368020 SLC25A41Q8N5S1 370 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 GPATCH11Q8N954 259 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 ARRDC2Q8TBH0 407 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 KCTD4Q8WVF5 259 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 PRR11Q96HE9 360 aaPredicted RBP14.11□□□□□ -0.15
USF1-202ENST00000368020 FAR2Q96K12 515 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 B3GALT6Q96L58 329 aa14.11□□□□□ -0.15
USF1-202ENST00000368020 ZNF512Q96ME7 567 aaPredicted RBP14.11□□□□□ -0.15
USF1-202ENST00000368020 GATA5Q9BWX5 397 aaPredicted RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms