RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 FAM72AQ5TYM5 149 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 FAM72DQ6L9T8 149 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 DHRS13Q6UX07 377 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 NUDT18Q6ZVK8 323 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 TRMT10CQ7L0Y3 403 aaKnown RBP11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 TADA2BQ86TJ2 420 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 PRUNE1Q86TP1 453 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 HOOK3Q86VS8 718 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 FAM72BQ86X60 149 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 NAT16Q8N8M0 369 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 FAM71DQ8N9W8 422 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 ZFRQ96KR1 1074 aaKnown RBP11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 FCRL2Q96LA5 508 aaPredicted RBP11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 C1orf74Q96LT6 269 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 ZIM3Q96PE6 472 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 SH3GL2Q99962 352 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 PHACTR1Q9C0D0 580 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 BRD8Q9H0E9 1235 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 MIR1-1HGQ9H1L0 117 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 PABPC3Q9H361 631 aaKnown RBP11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 C10orf88Q9H8K7 445 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 OR12D3Q9UGF7 316 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 CPQQ9Y646 472 aa11.44□□□□□ -0.58
CSNK1E-202ENST00000366216 C5orf60A6NFR6 353 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 ERVH48-1M5A8F1 160 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 PPP1R12AO14974 1030 aaPredicted RBP11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 BCAT2O15382 392 aaPredicted RBP11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 FGF10O15520 208 aaPredicted RBP11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 KCNN4O15554 427 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 MFSD11O43934 449 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 TULP3O75386 442 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 PAGE1O75459 146 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 GCATO75600 419 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 LRIG2O94898 1065 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 RBL1P28749 1068 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 ACTN2P35609 894 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 GGCXP38435 758 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 PPP3CCP48454 512 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 TBX4P57082 545 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 CBLBQ13191 982 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 SUZ12Q15022 739 aaKnown RBP11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 PRKD1Q15139 912 aaPredicted RBP11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 HSP90B2PQ58FF3 399 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 MANEALQ5VSG8 457 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 EGFLAMQ63HQ2 1017 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 SDE2Q6IQ49 451 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 KLHDC10Q6PID8 442 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 TMPRSS12Q86WS5 348 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 PPIL6Q8IXY8 311 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 NAT8LQ8N9F0 302 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 TERB1Q8NA31 727 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 TFB1MQ8WVM0 346 aaKnown RBP11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 MRGPRX1Q96LB2 322 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 RUFY1Q96T51 708 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 FERMT1Q9BQL6 677 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 TRPM5Q9NZQ8 1165 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 CFAP97Q9P2B7 532 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 TBC1D14Q9P2M4 693 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 DEC1Q9P2X7 70 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 SLC12A6Q9UHW9 1150 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 DNMT3LQ9UJW3 386 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 ATP8A1Q9Y2Q0 1164 aa11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 HBS1LQ9Y450 684 aaKnown RBP11.43□□□□□ -0.58
CSNK1E-202ENST00000366216 DOCK9Q9BZ29 2069 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 WASH4PA8MWX3 477 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 PYCARD-AS1I3L0S3 204 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 MSI1O43347 362 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 SYF2O95926 243 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 OAS1P00973 400 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 IGLV3-27P01718 113 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 APOEP02649 317 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 NUDT17P0C025 328 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 MX2P20592 715 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 EPHB2P29323 1055 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 CD6P30203 668 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 SERPINB6P35237 376 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 HNF1BP35680 557 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 CHKAP35790 457 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 MAGEA6P43360 314 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 TUBP50607 506 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 EIF3BP55884 814 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 CLDN6P56747 220 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 GAD2Q05329 585 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 EFEMP1Q12805 493 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 C10orf120Q5SQS8 335 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 ARTNQ5T4W7 220 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 C6orf118Q5T5N4 469 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 KIAA1324Q6UXG2 1013 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 CHPFQ8IZ52 775 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 LZTR1Q8N653 840 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 ATP6V0D2Q8N8Y2 350 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 FAM181AQ8N9Y4 354 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 CADM4Q8NFZ8 388 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 UBLCP1Q8WVY7 318 aaPredicted RBP11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 CPT1BQ92523 772 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 PRCCQ92733 491 aaPredicted RBP11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 TBC1D31Q96DN5 1066 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 TOE1Q96GM8 510 aaKnown RBP11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 GABRG3Q99928 467 aa11.42□□□□□ -0.58
CSNK1E-202ENST00000366216 EPB41L4BQ9H329 900 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms