RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 NIPA2Q8N8Q9 360 aa13.81□□□□□ -0.2
TNFRSF1A-202ENST00000366159 TSEN2Q8NCE0 465 aaKnown RBP13.81□□□□□ -0.2
TNFRSF1A-202ENST00000366159 ZNF548Q8NEK5 533 aaPredicted RBP13.81□□□□□ -0.2
TNFRSF1A-202ENST00000366159 ECHDC3Q96DC8 303 aa13.81□□□□□ -0.2
TNFRSF1A-202ENST00000366159 THAP2Q9H0W7 228 aa13.81□□□□□ -0.2
TNFRSF1A-202ENST00000366159 DNAJC28Q9NX36 388 aa13.81□□□□□ -0.2
TNFRSF1A-202ENST00000366159 MYO1AQ9UBC5 1043 aa13.81□□□□□ -0.2
TNFRSF1A-202ENST00000366159 RALYQ9UKM9 306 aaKnown RBP13.81□□□□□ -0.2
TNFRSF1A-202ENST00000366159 CSNK1G3Q9Y6M4 447 aa13.81□□□□□ -0.2
TNFRSF1A-202ENST00000366159 LRRK1Q38SD2 2015 aa13.81□□□□□ -0.2
TNFRSF1A-202ENST00000366159 A0A087X0T9 212 aa13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 NEMP2A6NFY4 417 aa13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 K7ESM1 405 aa13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 RIOK3O14730 519 aaKnown RBP13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 MUSKO15146 869 aa13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 GYPCP04921 128 aa13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 SERPING1P05155 500 aa13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 CYP1A2P05177 515 aa13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 FAM228BP0C875 321 aa13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 SLC25A11Q02978 314 aaKnown RBP13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 ELP6Q0PNE2 266 aa13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 TARDBPQ13148 414 aaKnown RBP eCLIP13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 PIGHQ14442 188 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 RFTN1Q14699 578 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 PPP6R3Q5H9R7 873 aaPredicted RBP13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 HES3Q5TGS1 186 aa13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 TXNRD3NBQ6F5E7 133 aa13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 BRAT1Q6PJG6 821 aa13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 SRLQ86TD4 932 aa13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 CAMK1DQ8IU85 385 aa13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 LZTR1Q8N653 840 aa13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 DCBLD1Q8N8Z6 715 aa13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 CXorf40AQ8TE69 158 aa13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 SPOCK2Q92563 424 aa13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 IQCDQ96DY2 449 aa13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 APOLD1Q96LR9 279 aa13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 PCDH12Q9NPG4 1184 aa13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 ETNK2Q9NVF9 386 aa13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 MYLKQ15746 1914 aa13.8□□□□□ -0.2
TNFRSF1A-202ENST00000366159 LOC400499M0QZD8 3231 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 ACACAQ13085 2346 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 TRAFD1O14545 582 aaPredicted RBP13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 FFAR2O15552 330 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 DAPK3O43293 454 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 PALMO75781 387 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 NEBLO76041 1014 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 RARAP10276 462 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 JUPP14923 745 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 IL4RP24394 825 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 HNRNPH3P31942 346 aaKnown RBP13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 HNF1BP35680 557 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 MMP12P39900 470 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 E2F1Q01094 437 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 RTP5Q14D33 572 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 WSCD2Q2TBF2 565 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 CDCP2Q5VXM1 449 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 VPS36Q86VN1 386 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 FAM71BQ8TC56 605 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 TEKT4Q8WW24 435 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 TBATAQ96M53 351 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 ZNF599Q96NL3 588 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 CSPG4P5Q96PW8 444 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 PSKH2Q96QS6 385 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 WRAP53Q9BUR4 548 aaKnown RBP13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 DUSP23Q9BVJ7 150 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 NRSN2Q9GZP1 204 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 ZWILCHQ9H900 591 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 USP29Q9HBJ7 922 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 IPO11Q9UI26 975 aaKnown RBP13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 RAXQ9Y2V3 346 aa13.79□□□□□ -0.2
TNFRSF1A-202ENST00000366159 COL27A1Q8IZC6 1860 aaPredicted RBP13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 CFAP69A5D8W1 941 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 TPP1O14773 563 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 AQP9O43315 295 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 LZTS3O60299 673 aaPredicted RBP13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 GCATO75600 419 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 GP1BAP07359 652 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 ALPPL2P10696 532 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 MYF5P13349 255 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 C6P13671 934 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 JUNDP17535 347 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 CR2P20023 1033 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 AMPD1P23109 780 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 EIF4A3P38919 411 aaKnown RBP13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 LIG3P49916 1009 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 PEX5P50542 639 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 TPM4P67936 248 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 SLC10A7Q0GE19 358 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 PTK2BQ14289 1009 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 SMTNL2Q2TAL5 461 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 ZSCAN23Q3MJ62 389 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 TDRD12Q587J7 1177 aaKnown RBP13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 MACC1Q6ZN28 852 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 CPLX3Q8WVH0 158 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 BTN2A2Q8WVV5 523 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 BTBD6Q96KE9 485 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.78□□□□□ -0.26e-7■□□□□ 9.6
TNFRSF1A-202ENST00000366159 C1QTNF7Q9BXJ2 289 aa13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 TCEAL2Q9H3H9 227 aaPredicted RBP13.78□□□□□ -0.2
TNFRSF1A-202ENST00000366159 PCDH18Q9HCL0 1135 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms