RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 RAB17Q9H0T7 212 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 POLMQ9NP87 494 aaPredicted RBP12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 EIF2B3Q9NR50 452 aaKnown RBP12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 GOLGA6AQ9NYA3 693 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 DMGDHQ9UI17 866 aaKnown RBP12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 TPX2Q9ULW0 747 aaKnown RBP12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 UTP11Q9Y3A2 253 aaKnown RBP12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 ANKRD36A6QL64 1941 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 TSPAN11A1L157 253 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 C1QTNF3-AMACRE9PGA6 284 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 SUN1O94901 812 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 PGLSO95336 258 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 IL1BP01584 269 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 ITIH2P19823 946 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 TPSB2P20231 275 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 C5AR1P21730 350 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 CA4P22748 312 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 SLC8A1P32418 973 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 RPL21P46778 160 aaKnown RBP12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 RPL26P61254 145 aaKnown RBP12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 BASP1P80723 227 aaKnown RBP12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 CDK16Q00536 496 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 ZBTB16Q05516 673 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 KCNJ11Q14654 390 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 TPSAB1Q15661 275 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 CST6Q15828 149 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 RNASEH2BQ5TBB1 312 aaKnown RBP12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 ZNF776Q68DI1 518 aaPredicted RBP12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 PCGF5Q86SE9 256 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 IPMKQ8NFU5 416 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 PIH1D2Q8WWB5 315 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 SNF8Q96H20 258 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 FEM1CQ96JP0 617 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 MRGPRX1Q96LB2 322 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 LRRC40Q9H9A6 602 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 RPL26L1Q9UNX3 145 aaKnown RBP12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 CHKBQ9Y259 395 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 SNX24Q9Y343 169 aa12.51□□□□□ -0.41
NIF3L1-201ENST00000359683 TCRBV7S3A2A0A539 114 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 TCRBV21S2A2A0A5A6 115 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 E7EVH7 732 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 KPNA3O00505 521 aaPredicted RBP12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 TP73O15350 636 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 HEXIM1O94992 359 aaKnown RBP12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 PAPSS2O95340 614 aaPredicted RBP12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 NDST3O95803 873 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 ADH1BP00325 375 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 AGTP01019 485 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 APRTP07741 180 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 PDHA1P08559 390 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 GABRG2P18507 467 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 NDUFV2P19404 249 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 ITGB7P26010 798 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 CXCL12P48061 93 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 METAP1P53582 386 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 SPARCL1Q14515 664 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 PCSK7Q16549 785 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 ARMC12Q5T9G4 340 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 IZUMO3Q5VZ72 239 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 CCDC70Q6NSX1 233 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 BRAT1Q6PJG6 821 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 ZSWIM9Q86XI8 627 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 PPIL6Q8IXY8 311 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 NAT8LQ8N9F0 302 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 BBOF1Q8ND07 529 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 PRCCQ92733 491 aaPredicted RBP12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 ARRDC3Q96B67 414 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 SIPA1Q96FS4 1042 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 TRIM31Q9BZY9 425 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 ARNT2Q9HBZ2 717 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 WHRNQ9P202 907 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 PHTF1Q9UMS5 762 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 SCML1Q9UN30 329 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 PPIL1Q9Y3C6 166 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 PCDHB9Q9Y5E1 797 aa12.5□□□□□ -0.41
NIF3L1-201ENST00000359683 C16orf96A6NNT2 1141 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 NDC80O14777 642 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 MID1O15344 667 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 ALDH1A2O94788 518 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 SEC31AO94979 1220 aaKnown RBP12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 ATXN1LP0C7T5 689 aaKnown RBP12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 TIMP2P16035 220 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 PSMD8P48556 350 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 LMAN1P49257 510 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 CCR3P51677 355 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 POLR2LP62875 67 aaKnown RBP12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 MORF4L2Q15014 288 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 TRADDQ15628 312 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 SYCP2LQ5T4T6 812 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 ANKRD22Q5VYY1 191 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 NAPEPLDQ6IQ20 393 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 DENND5AQ6IQ26 1287 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 HIBCHQ6NVY1 386 aaPredicted RBP12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 KDELC2Q7Z4H8 507 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 LINC00523Q86TU6 105 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 HOOK3Q86VS8 718 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 RASSF3Q86WH2 238 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 CAMKK1Q8N5S9 505 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 MCUQ8NE86 351 aa12.49□□□□□ -0.41
NIF3L1-201ENST00000359683 TSTD1Q8NFU3 115 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms