RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 DIRAS2Q96HU8 199 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 KPNA5O15131 536 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 FSCN1Q16658 493 aaKnown RBP8.82□□□□□ -1
COL6A6-201ENST00000358511 TRMOQ9BU70 441 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 TRPC4Q9UBN4 977 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 FETUBQ9UGM5 382 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 SAMD4AQ9UPU9 718 aaKnown RBP8.82□□□□□ -1
COL6A6-201ENST00000358511 EPHB6O15197 1021 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 SLC22A3O75751 556 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 PSEN1P49768 467 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 SMU1Q2TAY7 513 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 ESRP1Q6NXG1 681 aaKnown RBP8.82□□□□□ -1
COL6A6-201ENST00000358511 SPOCK2Q92563 424 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 ATPIF1Q9UII2 106 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 PGRMC2O15173 223 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 LYPLA1O75608 230 aaPredicted RBP8.82□□□□□ -1
COL6A6-201ENST00000358511 ANGPTL1O95841 491 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 SMIM11AP58511 58 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 AP3S2P59780 193 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 PPATQ06203 517 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 EARS2Q5JPH6 523 aaKnown RBP8.82□□□□□ -1
COL6A6-201ENST00000358511 C10orf120Q5SQS8 335 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 IRAK1BP1Q5VVH5 260 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 FCGR1BQ92637 280 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 MASTLQ96GX5 879 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 CEP41Q9BYV8 373 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 AASDHPPTQ9NRN7 309 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 GPATCH2LQ9NWQ4 482 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 ZMYM5Q9UJ78 669 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 TSPAN16Q9UKR8 245 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 OGDHLQ9ULD0 1010 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 PPIEQ9UNP9 301 aaKnown RBP8.82□□□□□ -1
COL6A6-201ENST00000358511 PDE10AQ9Y233 779 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 RPTORQ8N122 1335 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 PCM1Q15154 2024 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 ASB14A6NK59 587 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 F8VP50 259 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 PEX11AO75192 247 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 PENKP01210 267 aaPredicted RBP8.82□□□□□ -1
COL6A6-201ENST00000358511 RBL1P28749 1068 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 EFCAB12Q6NXP0 572 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 MPZL3Q6UWV2 235 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 CCDC28AQ8IWP9 274 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 OR52L1Q8NGH7 329 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 MCOLN3Q8TDD5 553 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 SAE1Q9UBE0 346 aaPredicted RBP8.82□□□□□ -1
COL6A6-201ENST00000358511 OPTCQ9UBM4 332 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 POMPQ9Y244 141 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 SPACA6W5XKT8 324 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 KNDC1Q76NI1 1749 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 YES1P07947 543 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 HGFP14210 728 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 IGFBP5P24593 272 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 OR2B6P58173 313 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 CARTPTQ16568 116 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 CD101Q93033 1021 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 DSN1Q9H410 356 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 RIOX1Q9H6W3 641 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 RPS6KB2Q9UBS0 482 aa8.82□□□□□ -1
COL6A6-201ENST00000358511 SETD1AO15047 1707 aaKnown RBP8.81□□□□□ -1
COL6A6-201ENST00000358511 CCRL2O00421 344 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 RNASEH1O60930 286 aaKnown RBP8.81□□□□□ -1
COL6A6-201ENST00000358511 CCR1P32246 355 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 HALP42357 657 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 SLC9A3P48764 834 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 AP1S2P56377 157 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 IL2P60568 153 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 SLC1A5Q15758 541 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 HKDC1Q2TB90 917 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 IRF2BP2Q7Z5L9 587 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 ADGRF2Q8IZF7 708 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 GFM1Q96RP9 751 aaKnown RBP8.81□□□□□ -1
COL6A6-201ENST00000358511 TTYH1Q9H313 450 aaPredicted RBP8.81□□□□□ -1
COL6A6-201ENST00000358511 SEMA4BQ9NPR2 832 aaPredicted RBP8.81□□□□□ -1
COL6A6-201ENST00000358511 MKLN1Q9UL63 735 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 UBQLN1Q9UMX0 589 aaKnown RBP8.81□□□□□ -1
COL6A6-201ENST00000358511 DYRK1BQ9Y463 629 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 PIAS1O75925 651 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 MAGP20916 626 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 PSMD5Q16401 504 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 ADGRD1Q6QNK2 874 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 STK40Q8N2I9 435 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 NELL1Q92832 810 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 ROPN1LQ96C74 230 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 FKBP14Q9NWM8 211 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 NKX1-2Q9UD57 310 aaPredicted RBP8.81□□□□□ -1
COL6A6-201ENST00000358511 PSMB4P28070 264 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 RIPPLY1Q0D2K3 151 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 ADIGQ0VDE8 80 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 GNA13Q14344 377 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 CA9Q16790 459 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 IRF2BPLQ9H1B7 796 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 BLOC1S4Q9NUP1 217 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 LYVE1Q9Y5Y7 322 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 hCG_1818297A0A087WSY0 165 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 CLPXO76031 633 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 MICAL2O94851 1124 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 BMP10O95393 424 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 ICAM1P05362 532 aa8.81□□□□□ -1
COL6A6-201ENST00000358511 NR2F6P10588 404 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms