RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 KLF11O14901 512 aa9.4□□□□□ -0.91
SMARCAL1-202ENST00000358207 NDUFA2O43678 99 aa9.4□□□□□ -0.91
SMARCAL1-202ENST00000358207 CALCAP01258 141 aa9.4□□□□□ -0.91
SMARCAL1-202ENST00000358207 SUPT20HL2P0C7V6 817 aa9.4□□□□□ -0.91
SMARCAL1-202ENST00000358207 SPNP16150 400 aa9.4□□□□□ -0.91
SMARCAL1-202ENST00000358207 SERPINB1P30740 379 aa9.4□□□□□ -0.91
SMARCAL1-202ENST00000358207 POLR2IP36954 125 aaKnown RBP9.4□□□□□ -0.91
SMARCAL1-202ENST00000358207 CLCN3P51790 818 aa9.4□□□□□ -0.91
SMARCAL1-202ENST00000358207 CLEC16AQ2KHT3 1053 aa9.4□□□□□ -0.91
SMARCAL1-202ENST00000358207 ATG16L1Q676U5 607 aa9.4□□□□□ -0.91
SMARCAL1-202ENST00000358207 TAPT1Q6NXT6 567 aa9.4□□□□□ -0.91
SMARCAL1-202ENST00000358207 GLIS1Q8NBF1 620 aa9.4□□□□□ -0.91
SMARCAL1-202ENST00000358207 UROC1Q96N76 676 aa9.4□□□□□ -0.91
SMARCAL1-202ENST00000358207 SNX18Q96RF0 628 aa9.4□□□□□ -0.91
SMARCAL1-202ENST00000358207 C17orf62Q9BQA9 187 aa9.4□□□□□ -0.91
SMARCAL1-202ENST00000358207 KCNN2Q9H2S1 579 aa9.4□□□□□ -0.91
SMARCAL1-202ENST00000358207 EPS8L2Q9H6S3 715 aa9.4□□□□□ -0.91
SMARCAL1-202ENST00000358207 KMT5AQ9NQR1 393 aa9.4□□□□□ -0.91
SMARCAL1-202ENST00000358207 CYP26B1Q9NR63 512 aa9.4□□□□□ -0.91
SMARCAL1-202ENST00000358207 CPNE7Q9UBL6 633 aa9.4□□□□□ -0.91
SMARCAL1-202ENST00000358207 PCDHGB3Q9Y5G1 929 aa9.4□□□□□ -0.91
SMARCAL1-202ENST00000358207 HNRNPDLO14979 420 aaKnown RBP9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 HTRA2O43464 458 aaPredicted RBP9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 GCLMP48507 274 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 JAK3P52333 1124 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 HADHBP55084 474 aaKnown RBP9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 CDC20Q12834 499 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 NEDD8Q15843 81 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 SH2D5Q6ZV89 423 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 KCTD8Q6ZWB6 473 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 PTAR1Q7Z6K3 402 aaPredicted RBP9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 CBWD2Q8IUF1 395 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 MFSD4AQ8N468 514 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 TMEM35BQ8NCS4 154 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 MTG1Q9BT17 334 aaPredicted RBP9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 RNPEPQ9H4A4 650 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 AGPAT3Q9NRZ7 376 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 UGT2B4P06133 528 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 FPGSQ05932 587 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 AQP6Q13520 282 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 ALCAMQ13740 583 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 TEX44Q53QW1 395 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 NHSL2Q5HYW2 709 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 ADGRD1Q6QNK2 874 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 KIAA0408Q6ZU52 694 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 ZBTB33Q86T24 672 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 ANKRD53Q8N9V6 530 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 SIMC1Q8NDZ2 872 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 LRCH3Q96II8 777 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 USB1Q9BQ65 265 aaKnown RBP9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 KCND2Q9NZV8 630 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 TMEM9Q9P0T7 183 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 PCSK1NQ9UHG2 260 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 SLCO3A1Q9UIG8 710 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 CPSF3Q9UKF6 684 aaKnown RBP9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 HCN4Q9Y3Q4 1203 aa9.39□□□□□ -0.91
SMARCAL1-202ENST00000358207 CLUHO75153 1309 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 CYB561D2O14569 222 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 TLR3O15455 904 aaKnown RBP9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 AKAP10O43572 662 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 CCNKO75909 580 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 CBLP22681 906 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 AP2S1P53680 142 aaPredicted RBP9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 DMP1Q13316 513 aaPredicted RBP9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 FLOT2Q14254 428 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 CBWD6Q4V339 395 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 CBWD3Q5JTY5 395 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 CBWD5Q5RIA9 395 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 FOXR2Q6PJQ5 311 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 SNX32Q86XE0 403 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 C4orf19Q8IY42 314 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 BHLHE22Q8NFJ8 381 aaPredicted RBP9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 ZNF778Q96MU6 729 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 KCNK16Q96T55 309 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 PAFAH2Q99487 392 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 VRTNQ9H8Y1 702 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 HMG20AQ9NP66 347 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 SEPT11Q9NVA2 429 aaKnown RBP9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 SUCOQ9UBS9 1254 aaKnown RBP9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 DNAJC12Q9UKB3 198 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 PSME2Q9UL46 239 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 VPS4AQ9UN37 437 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 TCAF1Q9Y4C2 921 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 KIAA1671Q9BY89 1806 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 SSTR1P30872 391 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 L1CAMP32004 1257 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 TTKP33981 857 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 HTR2BP41595 481 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 STAT1P42224 750 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 TMPRSS15P98073 1019 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 IL1RL1Q01638 556 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 VAC14Q08AM6 782 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 EMC2Q15006 297 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 C6orf10Q5SRN2 563 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 ZBTB41Q5SVQ8 909 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 ATAD3CQ5T2N8 411 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 ZFP1Q6P2D0 407 aa9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 TTC33Q6PID6 262 aaPredicted RBP9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 SYDE1Q6ZW31 735 aaPredicted RBP9.38□□□□□ -0.91
SMARCAL1-202ENST00000358207 RHPN2Q8IUC4 686 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms