RNA–Protein interactions for RNA: ENST00000357450.8

SMC1B-201, Transcript of structural maintenance of chromosomes 1B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMC1B, Length 4,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-201ENST00000357450 ATXN1LP0C7T5 689 aaKnown RBP3.83□□□□□ -1.8
SMC1B-201ENST00000357450 C1QTNF9P0C862 333 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 ATF6P18850 670 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 POU3F3P20264 500 aaPredicted RBP3.83□□□□□ -1.8
SMC1B-201ENST00000357450 LRPAP1P30533 357 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 TPMTP51580 245 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 NEK3P51956 506 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 NCKAP1LP55160 1127 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 GABPB1Q06547 395 aaPredicted RBP3.83□□□□□ -1.8
SMC1B-201ENST00000357450 PTK2BQ14289 1009 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 EIF4HQ15056 248 aaKnown RBP3.83□□□□□ -1.8
SMC1B-201ENST00000357450 KRT31Q15323 416 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 SMTNL2Q2TAL5 461 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 VWA3BQ502W6 1294 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 HES3Q5TGS1 186 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 RTL10Q7L3V2 364 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 ZNF761Q86XN6 746 aaPredicted RBP3.83□□□□□ -1.8
SMC1B-201ENST00000357450 GKN2Q86XP6 184 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 NAXDQ8IW45 347 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 OXR1Q8N573 874 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 OR6Y1Q8NGX8 325 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 BLOC1S5Q8TDH9 187 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 MR1Q95460 341 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 TSACCQ96A04 125 aaPredicted RBP3.83□□□□□ -1.8
SMC1B-201ENST00000357450 MCEEQ96PE7 176 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 RNF38Q9H0F5 515 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 NUCKS1Q9H1E3 243 aaKnown RBP3.83□□□□□ -1.8
SMC1B-201ENST00000357450 PCMTD2Q9NV79 361 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 GRHL1Q9NZI5 618 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 ZMIZ1Q9ULJ6 1067 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 VPS4AQ9UN37 437 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 ANKRD6Q9Y2G4 727 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 DAAM1Q9Y4D1 1078 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 YJEFN3A6XGL0 299 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 E7ENQ6 273 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 F8W8V4 182 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 IFRD1O00458 451 aaPredicted RBP3.83□□□□□ -1.8
SMC1B-201ENST00000357450 SLC30A4O14863 429 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 STX7O15400 261 aaKnown RBP3.83□□□□□ -1.8
SMC1B-201ENST00000357450 KRT1P04264 644 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 CALB1P05937 261 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 KLK3P07288 261 aaPredicted RBP3.83□□□□□ -1.8
SMC1B-201ENST00000357450 CHRNB1P11230 501 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 ABL2P42684 1182 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 IL12RB1P42701 662 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 PTGIRP43119 386 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 CLDN10P78369 228 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 TMPRSS15P98073 1019 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 TARDBPQ13148 414 aaKnown RBP eCLIP3.83□□□□□ -1.8
SMC1B-201ENST00000357450 ELOCQ15369 112 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 TOMM20Q15388 145 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 GEN1Q17RS7 908 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 CFAP221Q4G0U5 840 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 ATXN7L2Q5T6C5 722 aaPredicted RBP3.83□□□□□ -1.8
SMC1B-201ENST00000357450 CDCA2Q69YH5 1023 aaPredicted RBP3.83□□□□□ -1.8
SMC1B-201ENST00000357450 NAPEPLDQ6IQ20 393 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 PID1Q7Z2X4 250 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 RETREG3Q86VR2 466 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 GALNT13Q8IUC8 556 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 PHYKPLQ8IUZ5 450 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 RAB42Q8N4Z0 105 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 DQX1Q8TE96 717 aaKnown RBP3.83□□□□□ -1.8
SMC1B-201ENST00000357450 BTN2A3PQ96KV6 586 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 GORASP1Q9BQQ3 440 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 MRPL47Q9HD33 250 aaKnown RBP3.83□□□□□ -1.8
SMC1B-201ENST00000357450 KLHL11Q9NVR0 708 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.83□□□□□ -1.8
SMC1B-201ENST00000357450 NEUROG3Q9Y4Z2 214 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 PCDHGA5Q9Y5G8 931 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 V9GYY5 206 aaPredicted RBP3.83□□□□□ -1.8
SMC1B-201ENST00000357450 ANK2Q01484 3957 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 A1L4Q6 167 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 H0Y8X5 98 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 ENC1O14682 589 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 CLDN11O75508 207 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 TNFP01375 233 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 GLI1P08151 1106 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 ZNF806P0C7X5 589 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 CDH3P22223 829 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 CHRNA3P32297 505 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 OC90Q02509 493 aaPredicted RBP3.83□□□□□ -1.8
SMC1B-201ENST00000357450 PEX6Q13608 980 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 HNRNPDQ14103 355 aaKnown RBP3.83□□□□□ -1.8
SMC1B-201ENST00000357450 MAN2A1Q16706 1144 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 TMTC4Q5T4D3 741 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 FSTL4Q6MZW2 842 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 GPR155Q7Z3F1 870 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 C14orf80Q86SX3 495 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 DNAAF5Q86Y56 855 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 IL17RCQ8NAC3 791 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 FAM172AQ8WUF8 416 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 C8orf48Q96LL4 319 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 ERGIC2Q96RQ1 377 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 VN1R3Q9BXE9 311 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 NDST4Q9H3R1 872 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 ATP13A3Q9H7F0 1226 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 CAPN10Q9HC96 672 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 CNGB3Q9NQW8 809 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 OR12D3Q9UGF7 316 aa3.83□□□□□ -1.8
SMC1B-201ENST00000357450 CD84Q9UIB8 345 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms