RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 FAIM2Q9BWQ8 316 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 SLC22A4Q9H015 551 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 SPASTQ9UBP0 616 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 ZNF70Q9UC06 446 aaPredicted RBP6.61□□□□□ -1.35
VPS13B-202ENST00000357162 LIMD1Q9UGP4 676 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 PCDHB12Q9Y5F1 795 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 GNG2P59768 71 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 ANKRD52Q8NB46 1076 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 TAMM41Q96BW9 452 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 ZFYVE28Q9HCC9 887 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 AP2S1P53680 142 aaPredicted RBP6.61□□□□□ -1.35
VPS13B-202ENST00000357162 VWA5B1Q5TIE3 1220 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 ZNF34Q8IZ26 560 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 IPMKQ8NFU5 416 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 ZBTB9Q96C00 473 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 FAM84BQ96KN1 310 aaPredicted RBP6.61□□□□□ -1.35
VPS13B-202ENST00000357162 ZNF512Q96ME7 567 aaPredicted RBP6.61□□□□□ -1.35
VPS13B-202ENST00000357162 ZNF347Q96SE7 839 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 ZNF112Q9UJU3 913 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 PIEZO1Q92508 2521 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 IFT172Q9UG01 1749 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 ALDH1A2O94788 518 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 VAPBO95292 243 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 ASS1P00966 412 aaKnown RBP6.61□□□□□ -1.35
VPS13B-202ENST00000357162 AFTPHQ6ULP2 937 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 UBASH3BQ8TF42 649 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 CRELD1Q96HD1 420 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 TBL1YQ9BQ87 522 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 GGA3Q9NZ52 723 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 AGAP1Q9UPQ3 857 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 DDX3YO15523 660 aaKnown RBP6.61□□□□□ -1.35
VPS13B-202ENST00000357162 TCEA2Q15560 299 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 CAMK1GQ96NX5 476 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 MND1Q9BWT6 205 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 AASSQ9UDR5 926 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 HSPE1-MOB4S4R3N1 261 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 KIAA2026Q5HYC2 2103 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 PTPN13Q12923 2485 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 FADS2O95864 444 aaKnown RBP6.61□□□□□ -1.35
VPS13B-202ENST00000357162 PORP16435 677 aaPredicted RBP6.61□□□□□ -1.35
VPS13B-202ENST00000357162 EPB42P16452 691 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 ADGRE1Q14246 886 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 TTLL6Q8N841 843 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 SMYD1Q8NB12 490 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 B3GNT3Q9Y2A9 372 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 C3P01024 1663 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.61□□□□□ -1.35
VPS13B-202ENST00000357162 TFEBP19484 476 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 ARHGDIBP52566 201 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 PRKCQQ04759 706 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 LLGL1Q15334 1064 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 CYP2A13Q16696 494 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 KIZQ2M2Z5 673 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 FAM47BQ8NA70 645 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 ITCHQ96J02 903 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 PRKAG2Q9UGJ0 569 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 FAM237BA0A1B0GVD1 139 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 TNFRSF21O75509 655 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 GCATO75600 419 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 PET100P0DJ07 73 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 SMCO1Q147U7 214 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 C14orf105Q9NVL8 296 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 MYOM1P52179 1685 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 PP2D1A8MPX8 630 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 SLC4A1P02730 911 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 ITGA4P13612 1032 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 GRIA1P42261 906 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 GSTM5P46439 218 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 UGT2B15P54855 530 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 MAPKAPK3Q16644 382 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 ATP13A5Q4VNC0 1218 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 EPHX4Q8IUS5 362 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 ZNF540Q8NDQ6 660 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 FIG4Q92562 907 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 SCGB3A2Q96PL1 93 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 TMEM121Q9BTD3 319 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 TGM6O95932 706 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 YWHAZP63104 245 aaKnown RBP6.61□□□□□ -1.35
VPS13B-202ENST00000357162 PITPNAQ00169 270 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 GALNT3Q14435 633 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 ZBTB33Q86T24 672 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 UTP15Q8TED0 518 aaKnown RBP6.61□□□□□ -1.35
VPS13B-202ENST00000357162 CAPSLQ8WWF8 208 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 PRCCQ92733 491 aaPredicted RBP6.61□□□□□ -1.35
VPS13B-202ENST00000357162 CERS2Q96G23 380 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 GPATCH1Q9BRR8 931 aaKnown RBP6.61□□□□□ -1.35
VPS13B-202ENST00000357162 OXCT2Q9BYC2 517 aaPredicted RBP6.61□□□□□ -1.35
VPS13B-202ENST00000357162 CD93Q9NPY3 652 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 TRPV5Q9NQA5 729 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 PCDHGC3Q9UN70 934 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 BCKDKO14874 412 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 AZIN1O14977 448 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 KHDRBS3O75525 346 aaKnown RBP6.61□□□□□ -1.35
VPS13B-202ENST00000357162 NOS3P29474 1203 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 NME3Q13232 169 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 SMTNL2Q2TAL5 461 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 TMEM139Q8IV31 216 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 MAP4K3Q8IVH8 894 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 CISHQ9NSE2 258 aa6.61□□□□□ -1.35
VPS13B-202ENST00000357162 MRPL39Q9NYK5 338 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms