RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 EFCAB14O75071 495 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 OR6B1O95007 311 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 HMBSP08397 361 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 FDFT1P37268 417 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 NUMBP49757 651 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 KCNQ1P51787 676 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 FOLH1Q04609 750 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 KLF10Q13118 480 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 RAB33AQ14088 237 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 SLC5A9Q2M3M2 681 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 GRAMD1BQ3KR37 738 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 ANKRD20A4Q4UJ75 823 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 EPGNQ6UW88 154 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 PSTKQ8IV42 348 aaKnown RBP8.69□□□□□ -1.02
TRIM55-204ENST00000353317 AGR3Q8TD06 166 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 RNF34Q969K3 372 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 MOCOSQ96EN8 888 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 ZNF419Q96HQ0 510 aaPredicted RBP8.69□□□□□ -1.02
TRIM55-204ENST00000353317 LENG8Q96PV6 779 aaPredicted RBP8.69□□□□□ -1.02
TRIM55-204ENST00000353317 GCNAQ96QF7 691 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 SLC22A12Q96S37 553 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 NDNQ99608 321 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 ZBED2Q9BTP6 218 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 TTLL2Q9BWV7 592 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 UBE2OQ9C0C9 1292 aaKnown RBP8.69□□□□□ -1.02
TRIM55-204ENST00000353317 OCEL1Q9H607 264 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 ZNF334Q9HCZ1 680 aaPredicted RBP8.69□□□□□ -1.02
TRIM55-204ENST00000353317 MPP6Q9NZW5 540 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 TXNDC16Q9P2K2 825 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 PCDHB12Q9Y5F1 795 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 HS3ST4Q9Y661 456 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 SLC4A7Q9Y6M7 1214 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 COMMD3-BMI1R4GMX3 469 aa8.69□□□□□ -1.02
TRIM55-204ENST00000353317 C2orf78A6NCI8 922 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 RNF103O00237 685 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 PGM3O95394 542 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 F9P00740 461 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 DESP17661 470 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 MX2P20592 715 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 PSMB4P28070 264 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 GP5P40197 560 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 ARL4AP40617 200 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 CHN2P52757 468 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 ZXDBP98169 803 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 LSAMPQ13449 338 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 TLR1Q15399 786 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 OGFRL1Q5TC84 451 aaPredicted RBP8.68□□□□□ -1.02
TRIM55-204ENST00000353317 MANEALQ5VSG8 457 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 MSANTD2Q6P1R3 559 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 ARHGAP36Q6ZRI8 547 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 TMC7Q7Z402 723 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 ZNF683Q8IZ20 524 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 FIBCD1Q8N539 461 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 DCLK2Q8N568 766 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 ICA1LQ8NDH6 482 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 SP7Q8TDD2 431 aaPredicted RBP8.68□□□□□ -1.02
TRIM55-204ENST00000353317 NAT14Q8WUY8 206 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 HERVK_113Q902F9 699 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 CERS2Q96G23 380 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 P2RY11Q96G91 374 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 CELF6Q96J87 481 aaKnown RBP8.68□□□□□ -1.02
TRIM55-204ENST00000353317 FCRL3Q96P31 734 aaPredicted RBP8.68□□□□□ -1.02
TRIM55-204ENST00000353317 OR52B2Q96RD2 323 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 CDH19Q9H159 772 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 PRDM12Q9H4Q4 367 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 VCX3AQ9NNX9 186 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 RRN3Q9NYV6 651 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 PRKAG2Q9UGJ0 569 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 PCDHGB4Q9UN71 923 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 YIPF1Q9Y548 306 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 INSL6Q9Y581 213 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 PCDHGB5Q9Y5G0 923 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 RPS6KL1Q9Y6S9 549 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 C15orf38-AP3S2A0A0A6YYH1 394 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 G3V2L1 256 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 TGM5O43548 720 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 PEX1O43933 1283 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 POLBP06746 335 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 IRS1P35568 1242 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 SERPINB5P36952 375 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 ALDH1A3P47895 512 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 TWF1Q12792 350 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 PAFAH1B3Q15102 231 aaKnown RBP8.68□□□□□ -1.02
TRIM55-204ENST00000353317 DLG2Q15700 870 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 CCDC153Q494R4 210 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 C10orf120Q5SQS8 335 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 FSTL4Q6MZW2 842 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 ISLR2Q6UXK2 745 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 ARPINQ7Z6K5 226 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 EGFL6Q8IUX8 553 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 ZSCAN18Q8TBC5 510 aaPredicted RBP8.68□□□□□ -1.02
TRIM55-204ENST00000353317 C2orf15Q8WU43 125 aaKnown RBP8.68□□□□□ -1.02
TRIM55-204ENST00000353317 BTBD9Q96Q07 612 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 CYP2S1Q96SQ9 504 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 AGAP2Q99490 1192 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 RTKNQ9BST9 563 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 GKN1Q9NS71 199 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 CLIC5Q9NZA1 410 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 SSX2IPQ9Y2D8 614 aa8.68□□□□□ -1.02
TRIM55-204ENST00000353317 CHD5Q8TDI0 1954 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms