RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 CCDC112Q8NEF3 446 aa22.3■■□□□ 1.16
SNX3-202ENST00000349379 KIAA1524Q8TCG1 905 aa22.3■■□□□ 1.16
SNX3-202ENST00000349379 KLK6Q92876 244 aa22.3■■□□□ 1.16
SNX3-202ENST00000349379 C1QTNF2Q9BXJ5 285 aa22.3■■□□□ 1.16
SNX3-202ENST00000349379 SLC17A9Q9BYT1 436 aa22.3■■□□□ 1.16
SNX3-202ENST00000349379 AASDHPPTQ9NRN7 309 aa22.3■■□□□ 1.16
SNX3-202ENST00000349379 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.3■■□□□ 1.16
SNX3-202ENST00000349379 PCDHA3Q9Y5H8 950 aa22.3■■□□□ 1.16
SNX3-202ENST00000349379 ADGRG1Q9Y653 693 aa22.3■■□□□ 1.16
SNX3-202ENST00000349379 CACNA1AO00555 2505 aa22.3■■□□□ 1.16
SNX3-202ENST00000349379 hCG_1818297A0A087WSY0 165 aa22.29■■□□□ 1.16
SNX3-202ENST00000349379 DCDC2BA2VCK2 349 aa22.29■■□□□ 1.16
SNX3-202ENST00000349379 ARHGAP6O43182 974 aa22.29■■□□□ 1.16
SNX3-202ENST00000349379 OPHN1O60890 802 aa22.29■■□□□ 1.16
SNX3-202ENST00000349379 SOCS5O75159 536 aa22.29■■□□□ 1.16
SNX3-202ENST00000349379 CER1O95813 267 aa22.29■■□□□ 1.16
SNX3-202ENST00000349379 PRLRP16471 622 aa22.29■■□□□ 1.16
SNX3-202ENST00000349379 ITIH2P19823 946 aa22.29■■□□□ 1.16
SNX3-202ENST00000349379 HNRNPA2B1P22626 353 aaKnown RBP22.29■■□□□ 1.16
SNX3-202ENST00000349379 CTNNA2P26232 953 aa22.29■■□□□ 1.16
SNX3-202ENST00000349379 OVGP1Q12889 678 aa22.29■■□□□ 1.16
SNX3-202ENST00000349379 PPP2R5EQ16537 467 aa22.29■■□□□ 1.16
SNX3-202ENST00000349379 ZNF423Q2M1K9 1284 aa22.29■■□□□ 1.16
SNX3-202ENST00000349379 HLA-BQ31612 363 aa22.29■■□□□ 1.16
SNX3-202ENST00000349379 TMEM52BQ4KMG9 183 aa22.29■■□□□ 1.16
SNX3-202ENST00000349379 TFDP3Q5H9I0 405 aa22.29■■□□□ 1.16
SNX3-202ENST00000349379 NPNTQ6UXI9 565 aa22.29■■□□□ 1.16
SNX3-202ENST00000349379 ADAT2Q7Z6V5 191 aaKnown RBP22.29■■□□□ 1.16
SNX3-202ENST00000349379 CCDC13Q8IYE1 715 aa22.29■■□□□ 1.16
SNX3-202ENST00000349379 RCOR2Q8IZ40 523 aa22.29■■□□□ 1.16
SNX3-202ENST00000349379 LRRN4Q8WUT4 740 aa22.29■■□□□ 1.16
SNX3-202ENST00000349379 RBM41Q96IZ5 413 aaKnown RBP22.29■■□□□ 1.16
SNX3-202ENST00000349379 ZNF830Q96NB3 372 aaPredicted RBP22.29■■□□□ 1.16
SNX3-202ENST00000349379 GAREM1Q9H706 876 aa22.29■■□□□ 1.16
SNX3-202ENST00000349379 IL21RQ9HBE5 538 aa22.29■■□□□ 1.16
SNX3-202ENST00000349379 NOD2Q9HC29 1040 aa22.29■■□□□ 1.16
SNX3-202ENST00000349379 NT5MQ9NPB1 228 aa22.29■■□□□ 1.16
SNX3-202ENST00000349379 SCUBE2Q9NQ36 999 aa22.29■■□□□ 1.16
SNX3-202ENST00000349379 HEY1Q9Y5J3 304 aa22.29■■□□□ 1.16
SNX3-202ENST00000349379 TDRD6O60522 2096 aaKnown RBP22.29■■□□□ 1.16
SNX3-202ENST00000349379 TTC24A2A3L6 582 aaPredicted RBP22.28■■□□□ 1.16
SNX3-202ENST00000349379 RIOK3O14730 519 aaKnown RBP22.28■■□□□ 1.16
SNX3-202ENST00000349379 KRT10P13645 584 aa22.28■■□□□ 1.16
SNX3-202ENST00000349379 CCNB1P14635 433 aa22.28■■□□□ 1.16
SNX3-202ENST00000349379 PEX5P50542 639 aa22.28■■□□□ 1.16
SNX3-202ENST00000349379 NAP1L1P55209 391 aaKnown RBP22.28■■□□□ 1.16
SNX3-202ENST00000349379 ADCY2Q08462 1091 aa22.28■■□□□ 1.16
SNX3-202ENST00000349379 ELP6Q0PNE2 266 aa22.28■■□□□ 1.16
SNX3-202ENST00000349379 SLC14A1Q13336 389 aa22.28■■□□□ 1.16
SNX3-202ENST00000349379 TFDP2Q14188 446 aa22.28■■□□□ 1.16
SNX3-202ENST00000349379 UAP1L1Q3KQV9 507 aa22.28■■□□□ 1.16
SNX3-202ENST00000349379 SLC45A4Q5BKX6 768 aa22.28■■□□□ 1.16
SNX3-202ENST00000349379 NT5DC3Q86UY8 548 aa22.28■■□□□ 1.16
SNX3-202ENST00000349379 LRRC8AQ8IWT6 810 aa22.28■■□□□ 1.16
SNX3-202ENST00000349379 SKA1Q96BD8 255 aa22.28■■□□□ 1.16
SNX3-202ENST00000349379 LENG8Q96PV6 779 aaPredicted RBP22.28■■□□□ 1.16
SNX3-202ENST00000349379 LGMNQ99538 433 aa22.28■■□□□ 1.16
SNX3-202ENST00000349379 KLF6Q99612 283 aaPredicted RBP22.28■■□□□ 1.16
SNX3-202ENST00000349379 IL12RB2Q99665 862 aa22.28■■□□□ 1.16
SNX3-202ENST00000349379 POLR1EQ9GZS1 481 aaKnown RBP22.28■■□□□ 1.16
SNX3-202ENST00000349379 PCDH12Q9NPG4 1184 aa22.28■■□□□ 1.16
SNX3-202ENST00000349379 FNDC3AQ9Y2H6 1198 aaKnown RBP22.28■■□□□ 1.16
SNX3-202ENST00000349379 ATP8A1Q9Y2Q0 1164 aa22.28■■□□□ 1.16
SNX3-202ENST00000349379 A0A1W2PQ67 120 aa22.27■■□□□ 1.16
SNX3-202ENST00000349379 CCDC66A2RUB6 948 aa22.27■■□□□ 1.16
SNX3-202ENST00000349379 IGLON5A6NGN9 336 aa22.27■■□□□ 1.16
SNX3-202ENST00000349379 TLR4O00206 839 aa22.27■■□□□ 1.16
SNX3-202ENST00000349379 NEMP1O14524 444 aa22.27■■□□□ 1.16
SNX3-202ENST00000349379 CST8O60676 142 aa22.27■■□□□ 1.16
SNX3-202ENST00000349379 PAK4O96013 591 aaPredicted RBP22.27■■□□□ 1.16
SNX3-202ENST00000349379 CD59P13987 128 aa22.27■■□□□ 1.16
SNX3-202ENST00000349379 TGM2P21980 687 aa22.27■■□□□ 1.16
SNX3-202ENST00000349379 AKT2P31751 481 aa22.27■■□□□ 1.16
SNX3-202ENST00000349379 MMP12P39900 470 aa22.27■■□□□ 1.16
SNX3-202ENST00000349379 NR2C2P49116 596 aa22.27■■□□□ 1.16
SNX3-202ENST00000349379 NXPH1P58417 271 aa22.27■■□□□ 1.16
SNX3-202ENST00000349379 IFI35P80217 286 aaPredicted RBP22.27■■□□□ 1.16
SNX3-202ENST00000349379 STAT4Q14765 748 aa22.27■■□□□ 1.16
SNX3-202ENST00000349379 PDK1Q15118 436 aa22.27■■□□□ 1.16
SNX3-202ENST00000349379 GCNT7Q6ZNI0 430 aa22.27■■□□□ 1.16
SNX3-202ENST00000349379 DGLUCYQ7Z3D6 616 aa22.27■■□□□ 1.16
SNX3-202ENST00000349379 ABI3BPQ7Z7G0 1075 aa22.27■■□□□ 1.16
SNX3-202ENST00000349379 PIP4P1Q86T03 277 aa22.27■■□□□ 1.16
SNX3-202ENST00000349379 DENND6BQ8NEG7 585 aa22.27■■□□□ 1.16
SNX3-202ENST00000349379 BRD8Q9H0E9 1235 aa22.27■■□□□ 1.16
SNX3-202ENST00000349379 FZD3Q9NPG1 666 aa22.27■■□□□ 1.16
SNX3-202ENST00000349379 RBM22Q9NW64 420 aaKnown RBP eCLIP22.27■■□□□ 1.16
SNX3-202ENST00000349379 CA5BQ9Y2D0 317 aa22.27■■□□□ 1.16
SNX3-202ENST00000349379 HS3ST3A1Q9Y663 406 aa22.27■■□□□ 1.16
SNX3-202ENST00000349379 MACROD2A1Z1Q3 448 aa22.26■■□□□ 1.15
SNX3-202ENST00000349379 PPP1R12AO14974 1030 aaPredicted RBP22.26■■□□□ 1.15
SNX3-202ENST00000349379 RAD51BO15315 384 aa22.26■■□□□ 1.15
SNX3-202ENST00000349379 HLA-DQB2P05538 268 aa22.26■■□□□ 1.15
SNX3-202ENST00000349379 CSRP1P21291 193 aaKnown RBP22.26■■□□□ 1.15
SNX3-202ENST00000349379 C21orf59P57076 290 aa22.26■■□□□ 1.15
SNX3-202ENST00000349379 COPS2P61201 443 aa22.26■■□□□ 1.15
SNX3-202ENST00000349379 DYNLT1P63172 113 aa22.26■■□□□ 1.15
SNX3-202ENST00000349379 CCZ1BP86790 482 aa22.26■■□□□ 1.15
SNX3-202ENST00000349379 CCZ1P86791 482 aaPredicted RBP22.26■■□□□ 1.15
SNX3-202ENST00000349379 TRAF2Q12933 501 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms