RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 ANXA9O76027 345 aa18.23■□□□□ 0.51
PTP4A3-202ENST00000349124 B3GAT3O94766 335 aa18.23■□□□□ 0.51
PTP4A3-202ENST00000349124 ZNF26P17031 533 aaPredicted RBP18.23■□□□□ 0.51
PTP4A3-202ENST00000349124 RPL5P46777 297 aaKnown RBP18.23■□□□□ 0.51
PTP4A3-202ENST00000349124 WNT3AP56704 352 aa18.23■□□□□ 0.51
PTP4A3-202ENST00000349124 TMEM207Q6UWW9 146 aa18.23■□□□□ 0.51
PTP4A3-202ENST00000349124 SETD3Q86TU7 594 aaPredicted RBP18.23■□□□□ 0.51
PTP4A3-202ENST00000349124 ADCY4Q8NFM4 1077 aa18.23■□□□□ 0.51
PTP4A3-202ENST00000349124 LPGAT1Q92604 370 aa18.23■□□□□ 0.51
PTP4A3-202ENST00000349124 DGCR14Q96DF8 476 aaKnown RBP18.23■□□□□ 0.51
PTP4A3-202ENST00000349124 KLHL5Q96PQ7 755 aa18.23■□□□□ 0.51
PTP4A3-202ENST00000349124 DDX18Q9NVP1 670 aaKnown RBP18.23■□□□□ 0.51
PTP4A3-202ENST00000349124 ETAA1Q9NY74 926 aa18.23■□□□□ 0.51
PTP4A3-202ENST00000349124 C17orf102A2RUQ5 167 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 HAS3O00219 553 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 PRKAA2P54646 552 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 HERC3Q15034 1050 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 CYHR1Q6ZMK1 362 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 AGMOQ6ZNB7 445 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 CUZD1Q86UP6 607 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 OR10T2Q8NGX3 314 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 LRCH3Q96II8 777 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 SLC45A3Q96JT2 553 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 SLC29A1Q99808 456 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 CSNK1G1Q9HCP0 422 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 ARHGEF38Q9NXL2 777 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 CACNA2D2Q9NY47 1150 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 CPA4Q9UI42 421 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 RAB26Q9ULW5 256 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 KCTD3Q9Y597 815 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 PTGDR2Q9Y5Y4 395 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 TRIM38O00635 465 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 NPHS1O60500 1241 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 CDH13P55290 713 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 YBX1P67809 324 aaKnown RBP18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 COG7P83436 770 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 CACNB2Q08289 660 aaPredicted RBP18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 LRP8Q14114 963 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 FASTKQ14296 549 aaKnown RBP18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 CYTH1Q15438 398 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 TECRLQ5HYJ1 363 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 C9orf131Q5VYM1 1079 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 KLHDC10Q6PID8 442 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 PIWIL4Q7Z3Z4 852 aaKnown RBP18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 TFAP2DQ7Z6R9 452 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 PIM3Q86V86 326 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 KLHDC8BQ8IXV7 354 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 EME1Q96AY2 570 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 SLCO4A1Q96BD0 722 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 C3orf30Q96M34 536 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 ZNF512Q96ME7 567 aaPredicted RBP18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 VCX3AQ9NNX9 186 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 PTCH2Q9Y6C5 1203 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 PSMD12O00232 456 aaPredicted RBP18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 UBDO15205 165 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 GJB3O75712 270 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 RPL10P27635 214 aaKnown RBP18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 TRIM25Q14258 630 aaKnown RBP18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 PTPRCAPQ14761 206 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 SDHAF4Q5VUM1 108 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 POTEHQ6S545 545 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 DOCK3Q8IZD9 2030 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 TMEM86AQ8N2M4 240 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 SLC4A7Q9Y6M7 1214 aa18.22■□□□□ 0.51
PTP4A3-202ENST00000349124 SMIM31A0A1B0GVY4 71 aa18.21■□□□□ 0.51
PTP4A3-202ENST00000349124 ANKRD33BA6NCL7 494 aa18.21■□□□□ 0.51
PTP4A3-202ENST00000349124 TRPC5OSA6NMA1 111 aa18.21■□□□□ 0.51
PTP4A3-202ENST00000349124 SLC22A2O15244 555 aa18.21■□□□□ 0.51
PTP4A3-202ENST00000349124 IPO13O94829 963 aaKnown RBP18.21■□□□□ 0.51
PTP4A3-202ENST00000349124 ITGB1P05556 798 aa18.21■□□□□ 0.51
PTP4A3-202ENST00000349124 ZNF865P0CJ78 1059 aaPredicted RBP18.21■□□□□ 0.51
PTP4A3-202ENST00000349124 ADSLP30566 484 aaPredicted RBP18.21■□□□□ 0.51
PTP4A3-202ENST00000349124 ARSDP51689 593 aa18.21■□□□□ 0.51
PTP4A3-202ENST00000349124 ITKQ08881 620 aa18.21■□□□□ 0.51
PTP4A3-202ENST00000349124 REP15Q6BDI9 236 aa18.21■□□□□ 0.51
PTP4A3-202ENST00000349124 EXT2Q93063 718 aa18.21■□□□□ 0.51
PTP4A3-202ENST00000349124 ALG9Q9H6U8 611 aa18.21■□□□□ 0.51
PTP4A3-202ENST00000349124 IL1RL2Q9HB29 575 aa18.21■□□□□ 0.51
PTP4A3-202ENST00000349124 RNF11Q9Y3C5 154 aa18.21■□□□□ 0.51
PTP4A3-202ENST00000349124 AP4S1Q9Y587 144 aa18.21■□□□□ 0.51
PTP4A3-202ENST00000349124 SNX13Q9Y5W8 968 aa18.21■□□□□ 0.51
PTP4A3-202ENST00000349124 LRRC14BA6NHZ5 514 aa18.21■□□□□ 0.5
PTP4A3-202ENST00000349124 J3KR12 359 aa18.21■□□□□ 0.5
PTP4A3-202ENST00000349124 IRAK2O43187 625 aa18.21■□□□□ 0.5
PTP4A3-202ENST00000349124 PSMD3O43242 534 aa18.21■□□□□ 0.5
PTP4A3-202ENST00000349124 OR4Q2P0C623 313 aa18.21■□□□□ 0.5
PTP4A3-202ENST00000349124 RPS6KA3P51812 740 aa18.21■□□□□ 0.5
PTP4A3-202ENST00000349124 HK2P52789 917 aa18.21■□□□□ 0.5
PTP4A3-202ENST00000349124 GEMP55040 296 aa18.21■□□□□ 0.5
PTP4A3-202ENST00000349124 CDKN2DP55273 166 aa18.21■□□□□ 0.5
PTP4A3-202ENST00000349124 DYNC1I2Q13409 638 aaKnown RBP18.21■□□□□ 0.5
PTP4A3-202ENST00000349124 RFTN1Q14699 578 aaPredicted RBP18.21■□□□□ 0.5
PTP4A3-202ENST00000349124 UPP1Q16831 310 aa18.21■□□□□ 0.5
PTP4A3-202ENST00000349124 GPR158Q5T848 1215 aa18.21■□□□□ 0.5
PTP4A3-202ENST00000349124 CHSY3Q70JA7 882 aa18.21■□□□□ 0.5
PTP4A3-202ENST00000349124 Q9H521 79 aa18.21■□□□□ 0.5
PTP4A3-202ENST00000349124 NMUR1Q9HB89 426 aa18.21■□□□□ 0.5
PTP4A3-202ENST00000349124 RRN3Q9NYV6 651 aa18.21■□□□□ 0.5
PTP4A3-202ENST00000349124 CRYL1Q9Y2S2 319 aa18.21■□□□□ 0.5
PTP4A3-202ENST00000349124 PLXNB2O15031 1838 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms