RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 PLD6Q8N2A8 252 aaKnown RBP18.66■□□□□ 0.58
SMPD1-201ENST00000342245 MARK4Q96L34 752 aa18.66■□□□□ 0.58
SMPD1-201ENST00000342245 KIFC3Q9BVG8 833 aa18.66■□□□□ 0.58
SMPD1-201ENST00000342245 RHOBTB2Q9BYZ6 727 aa18.66■□□□□ 0.58
SMPD1-201ENST00000342245 STMN3Q9NZ72 180 aa18.66■□□□□ 0.58
SMPD1-201ENST00000342245 ZNF639Q9UID6 485 aa18.66■□□□□ 0.58
SMPD1-201ENST00000342245 MTF2Q9Y483 593 aaPredicted RBP18.66■□□□□ 0.58
SMPD1-201ENST00000342245 SNX5Q9Y5X3 404 aa18.66■□□□□ 0.58
SMPD1-201ENST00000342245 BTAF1O14981 1849 aa18.66■□□□□ 0.58
SMPD1-201ENST00000342245 ZSCAN5BA6NJL1 495 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 BBIP1A8MTZ0 92 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 NRP2O60462 931 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 CCNKO75909 580 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 METTL18O95568 372 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 CRHBPP24387 322 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 ALDH7A1P49419 539 aaKnown RBP18.65■□□□□ 0.58
SMPD1-201ENST00000342245 CDONQ4KMG0 1287 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 CEP78Q5JTW2 689 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 TAF2Q6P1X5 1199 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 HDAC10Q969S8 669 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 SPATA17Q96L03 361 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 ACE2Q9BYF1 805 aaPredicted RBP18.65■□□□□ 0.58
SMPD1-201ENST00000342245 SLA2Q9H6Q3 261 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 LRRC40Q9H9A6 602 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 DIABLOQ9NR28 239 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 ACTR3BQ9P1U1 418 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 SFMBT1Q9UHJ3 866 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 PSAT1Q9Y617 370 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 RAD51BO15315 384 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 NADKO95544 446 aaPredicted RBP18.65■□□□□ 0.58
SMPD1-201ENST00000342245 POLBP06746 335 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 UMPSP11172 480 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 HSD17B1P14061 328 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 LRPAP1P30533 357 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 CLCQ05315 142 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 PLCL1Q15111 1095 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 CDK10Q15131 360 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 NIPA1Q7RTP0 329 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 TBC1D21Q8IYX1 336 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 SVOPQ8N4V2 548 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 CGRRF1Q99675 332 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 ZBED2Q9BTP6 218 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 EIF2B3Q9NR50 452 aaKnown RBP18.65■□□□□ 0.58
SMPD1-201ENST00000342245 DSEQ9UL01 958 aa18.65■□□□□ 0.58
SMPD1-201ENST00000342245 TTC24A2A3L6 582 aaPredicted RBP18.64■□□□□ 0.58
SMPD1-201ENST00000342245 FAM25AB3EWG3 89 aa18.64■□□□□ 0.58
SMPD1-201ENST00000342245 FAM25CB3EWG5 89 aa18.64■□□□□ 0.58
SMPD1-201ENST00000342245 FAM25GB3EWG6 89 aa18.64■□□□□ 0.58
SMPD1-201ENST00000342245 SDHDO14521 159 aa18.64■□□□□ 0.58
SMPD1-201ENST00000342245 MED7O43513 233 aa18.64■□□□□ 0.58
SMPD1-201ENST00000342245 LTFP02788 710 aa18.64■□□□□ 0.58
SMPD1-201ENST00000342245 HTR1BP28222 390 aa18.64■□□□□ 0.58
SMPD1-201ENST00000342245 SLC7A2P52569 658 aa18.64■□□□□ 0.58
SMPD1-201ENST00000342245 TAF5Q15542 800 aa18.64■□□□□ 0.58
SMPD1-201ENST00000342245 PUS10Q3MIT2 529 aaKnown RBP18.64■□□□□ 0.58
SMPD1-201ENST00000342245 THAP5Q7Z6K1 395 aa18.64■□□□□ 0.58
SMPD1-201ENST00000342245 CMC1Q7Z7K0 106 aa18.64■□□□□ 0.58
SMPD1-201ENST00000342245 SLC51BQ86UW2 128 aa18.64■□□□□ 0.58
SMPD1-201ENST00000342245 SNX29P2Q8IUI4 249 aa18.64■□□□□ 0.58
SMPD1-201ENST00000342245 HACE1Q8IYU2 909 aa18.64■□□□□ 0.58
SMPD1-201ENST00000342245 MAGEE2Q8TD90 523 aaPredicted RBP18.64■□□□□ 0.58
SMPD1-201ENST00000342245 AFG1LQ8WV93 481 aa18.64■□□□□ 0.58
SMPD1-201ENST00000342245 CCDC78A2IDD5 438 aa18.64■□□□□ 0.57
SMPD1-201ENST00000342245 DDX39AO00148 427 aaKnown RBP18.64■□□□□ 0.57
SMPD1-201ENST00000342245 CDK2AP1O14519 115 aa18.64■□□□□ 0.57
SMPD1-201ENST00000342245 NPHS1O60500 1241 aa18.64■□□□□ 0.57
SMPD1-201ENST00000342245 RFC2P35250 354 aa18.64■□□□□ 0.57
SMPD1-201ENST00000342245 EIF2DP41214 584 aaKnown RBP18.64■□□□□ 0.57
SMPD1-201ENST00000342245 FCHO2Q0JRZ9 810 aa18.64■□□□□ 0.57
SMPD1-201ENST00000342245 AGKQ53H12 422 aa18.64■□□□□ 0.57
SMPD1-201ENST00000342245 ZNF484Q5JVG2 852 aa18.64■□□□□ 0.57
SMPD1-201ENST00000342245 PRR5LQ6MZQ0 368 aa18.64■□□□□ 0.57
SMPD1-201ENST00000342245 FKBP9P1Q75LS8 142 aa18.64■□□□□ 0.57
SMPD1-201ENST00000342245 LYSMD2Q8IV50 215 aa18.64■□□□□ 0.57
SMPD1-201ENST00000342245 OSCP1Q8WVF1 389 aa18.64■□□□□ 0.57
SMPD1-201ENST00000342245 UBXN10Q96LJ8 280 aa18.64■□□□□ 0.57
SMPD1-201ENST00000342245 IL12RB2Q99665 862 aa18.64■□□□□ 0.57
SMPD1-201ENST00000342245 RUBCNLQ9H714 662 aa18.64■□□□□ 0.57
SMPD1-201ENST00000342245 LRRC4Q9HBW1 653 aa18.64■□□□□ 0.57
SMPD1-201ENST00000342245 SLC17A6Q9P2U8 582 aa18.64■□□□□ 0.57
SMPD1-201ENST00000342245 ZNF487B1APH4 448 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 NRP1O14786 923 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 TNPO2O14787 897 aaKnown RBP18.63■□□□□ 0.57
SMPD1-201ENST00000342245 MTSS1O43312 755 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 DDHD2O94830 711 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 DLGAP3O95886 979 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 PKLRP30613 574 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 TNFAIP2Q03169 654 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 FRG1Q14331 258 aaKnown RBP18.63■□□□□ 0.57
SMPD1-201ENST00000342245 C15orf59Q2T9L4 293 aaPredicted RBP18.63■□□□□ 0.57
SMPD1-201ENST00000342245 PTPN20Q4JDL3 420 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 TBC1D10BQ4KMP7 808 aaPredicted RBP18.63■□□□□ 0.57
SMPD1-201ENST00000342245 XKR9Q5GH70 373 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 UBE2UQ5VVX9 321 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 PRSS48Q7RTY5 328 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 ADGRG5Q8IZF4 528 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 URGCPQ8TCY9 931 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.63■□□□□ 0.57
SMPD1-201ENST00000342245 CERS2Q96G23 380 aa18.63■□□□□ 0.57
SMPD1-201ENST00000342245 RPAP3Q9H6T3 665 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms