RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 TSPAN11A1L157 253 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 GOLGA6CA6NDK9 693 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 GOLGA6BA6NDN3 693 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 FAM47DPA6NHR8 397 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 TRAFD1O14545 582 aaPredicted RBP12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 PSMD3O43242 534 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 HTRA2O43464 458 aaPredicted RBP12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 TSPAN6O43657 245 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 AP1G1O43747 822 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 GJB3O75712 270 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 SEMA4FO95754 770 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 IFNB1P01574 187 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 GOLGA6DP0CG33 693 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 ADRB3P13945 408 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 NFKB1P19838 968 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 ACSL1P33121 698 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 CD68P34810 354 aaPredicted RBP12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 METAP1P53582 386 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 EPHB1P54762 984 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 GEMP55040 296 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 RPL26P61254 145 aaKnown RBP12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 SKOR1P84550 965 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 ELP6Q0PNE2 266 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 SRSF5Q13243 272 aaKnown RBP12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 SLC14A2Q15849 920 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 UGP2Q16851 508 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 P3H1Q32P28 736 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 SYCP2LQ5T4T6 812 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 ERAP2Q6P179 960 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 PARS2Q7L3T8 475 aaKnown RBP12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 PRPF39Q86UA1 669 aaKnown RBP12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 FRMD1Q8N878 549 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 CCDC110Q8TBZ0 833 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 FOXJ1Q92949 421 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 FAM131CQ96AQ9 280 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 ECHDC3Q96DC8 303 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 IFT43Q96FT9 208 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 ZNF419Q96HQ0 510 aaPredicted RBP12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 ZC3H10Q96K80 434 aaKnown RBP12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 RBM15Q96T37 977 aaKnown RBP eCLIP12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 ADGRE3Q9BY15 652 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 GOLGA6AQ9NYA3 693 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 SERGEFQ9UGK8 458 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 MBD1Q9UIS9 605 aaPredicted RBP12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 TPX2Q9ULW0 747 aaKnown RBP12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 RPL26L1Q9UNX3 145 aaKnown RBP12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 AAR2Q9Y312 384 aaKnown RBP12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 CACNA1IQ9P0X4 2223 aa12.01□□□□□ -0.49
SPTLC1-202ENST00000337841 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 METTL12A8MUP2 240 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 UPK3BL1B0FP48 263 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 UPK3BL2E5RIL1 263 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 PLRG1O43660 514 aaKnown RBP12□□□□□ -0.49
SPTLC1-202ENST00000337841 PMPCBO75439 489 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 URI1O94763 535 aaPredicted RBP12□□□□□ -0.49
SPTLC1-202ENST00000337841 PCDH8O95206 1070 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 PGLSO95336 258 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 CPP00450 1065 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 EPOP01588 193 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 MMP2P08253 660 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 COILP38432 576 aaPredicted RBP12□□□□□ -0.49
SPTLC1-202ENST00000337841 KCNJ1P48048 391 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 FAM193AP78312 1265 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 CDK18Q07002 472 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 TRAF2Q12933 501 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 MPP3Q13368 585 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 TUBB2AQ13885 445 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 CYP1B1Q16678 543 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 PLK5Q496M5 336 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 PIP5KL1Q5T9C9 394 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 AGBL4Q5VU57 503 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 PRR23BQ6ZRT6 265 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 TMEFF1Q8IYR6 380 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 SPATA22Q8NHS9 363 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 KIF18AQ8NI77 898 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 GRK7Q8WTQ7 553 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 VOPP1Q96AW1 172 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 RTP4Q96DX8 246 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 NSMCE3Q96MG7 304 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 TUBB2BQ9BVA1 445 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 DUSP15Q9H1R2 295 aaPredicted RBP12□□□□□ -0.49
SPTLC1-202ENST00000337841 GBA3Q9H227 469 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 PCDH9Q9HC56 1237 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 PREBQ9HCU5 417 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 CD93Q9NPY3 652 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 SMARCAL1Q9NZC9 954 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 PAK5Q9P286 719 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 CHKBQ9Y259 395 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 FADS3Q9Y5Q0 445 aa12□□□□□ -0.49
SPTLC1-202ENST00000337841 CHD5Q8TDI0 1954 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 PRR23AA6NEV1 266 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 CCDC188H7C350 402 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 RIOK3O14730 519 aaKnown RBP11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 RNGTTO60942 597 aaKnown RBP11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 PHF2O75151 1096 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 FSBPO95073 299 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 MT-CYBP00156 380 aaPredicted RBP11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 CYP2A6P11509 494 aaPredicted RBP11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 BCKDHBP21953 392 aa11.99□□□□□ -0.49
SPTLC1-202ENST00000337841 NUDT1P36639 197 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms